Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30996
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 152 1e-35
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 151 2e-35
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 147 4e-34
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 115 2e-24
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 113 4e-24
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 108 2e-22
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 95 2e-18
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 93 1e-17
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 87 7e-16
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 81 4e-14
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 79 1e-13
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 76 1e-12
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 75 3e-12
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 73 7e-12
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 63 2e-11
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 71 4e-11
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 69 2e-10
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 65 3e-09
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 63 8e-09
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 62 1e-08
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 1e-08
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 61 3e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 6e-08
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 60 1e-07
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 60 1e-07
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 58 3e-07
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 6e-06
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 53 8e-06
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 53 1e-05
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 52 1e-05
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 52 1e-05
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 47 7e-04
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 46 0.001
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 45 0.002
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 43 0.012
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.021
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 40 0.063
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 40 0.063
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.063
UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_UPI0000E48534 Cluster: PREDICTED: similar to ankyrin 2,... 38 0.44
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 37 0.59
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 37 0.78
UniRef50_Q4Q8X5 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 36 1.0
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 36 1.8
UniRef50_A2QSL8 Cluster: Contig An08c0280, complete genome; n=1;... 35 3.1
UniRef50_UPI00005852CD Cluster: PREDICTED: similar to solute car... 34 4.1
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 34 4.1
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 34 4.1
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 34 5.5
UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like pr... 33 7.2
UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909 ... 33 9.6
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 9.6
UniRef50_Q4RSU0 Cluster: Chromosome 12 SCAF14999, whole genome s... 33 9.6
UniRef50_Q1Q8Y0 Cluster: CheA signal transduction histidine kina... 33 9.6
UniRef50_A6QSZ3 Cluster: Predicted protein; n=2; Ajellomyces cap... 33 9.6
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 152 bits (369), Expect = 1e-35
Identities = 91/188 (48%), Positives = 118/188 (62%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 434
L+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GAIAP+ V +PA NT
Sbjct: 69 LEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNT 128
Query: 435 GLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLV 614
GLGPEKTSFFQALSI TKIS+GTIE + ++ + +YGL
Sbjct: 129 GLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLK 188
Query: 615 VKQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPHFHSP 794
+ QVYDSG+ F + DI ED + F +G L NVAA+S + G P PH
Sbjct: 189 IVQVYDSGSVFAP-SILDI-TEDDLIKQFMSG-LANVAAVSLQI-GYPTVA-SVPH-SIV 242
Query: 795 NGFQRNLL 818
NGF +NLL
Sbjct: 243 NGF-KNLL 249
Score = 91.9 bits (218), Expect = 2e-17
Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL* 232
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIR + K
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 233 CAKPSKTTGQQSSPRETVATH-QGQRWLRVHXXXXXXXXXQTVGEQSPGSSSSRCHCPIV 409
K + +Q+ E V H +G + Q + + P+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 410 XXXXXXXXXXXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLNI 589
+ F + + +G I+++VH++K G+KVGASEATLL ML I
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKI 180
Query: 590 SPF 598
PF
Sbjct: 181 FPF 183
Score = 35.5 bits (78), Expect = 1.8
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 187 SLRGSSIVLMGKNTMMRKAIKDH 255
SLRG + +LMGKNT +RKA++ H
Sbjct: 46 SLRGKATILMGKNTTIRKALRGH 68
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 151 bits (366), Expect = 2e-35
Identities = 93/190 (48%), Positives = 118/190 (62%), Gaps = 3/190 (1%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 434
L+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GAIAP V +PA NT
Sbjct: 69 LENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNT 128
Query: 435 GLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLH---SSY 605
GLGPEKTSFFQAL I TKIS+GTIE + P ++ + L+ SY
Sbjct: 129 GLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSY 188
Query: 606 GLVVKQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPHF 785
GL+++QVYD+G+ + DI ED+ F G + N+A++ + G P PH
Sbjct: 189 GLIIQQVYDNGSVYSP-EVLDI-TEDALHKRFLKG-VRNIASVCLQI-GYPTLA-SIPH- 242
Query: 786 HSPNGFQRNL 815
NG++R L
Sbjct: 243 TIINGYKRVL 252
Score = 111 bits (267), Expect = 2e-23
Identities = 71/186 (38%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL* 232
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR K
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 233 CAKPSKTTGQQSSPRETVATH-QGQRWLRVHXXXXXXXXXQTVGEQSPGSSSSRCHCPIV 409
K + + + E + H +G + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 410 XXXXXXXXXXXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATL---LNM 580
+ F + + +G I++DV ++KPGDKVGASEATL LNM
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 581 LNISPF 598
LNISPF
Sbjct: 181 LNISPF 186
Score = 42.3 bits (95), Expect = 0.016
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 187 SLRGSSIVLMGKNTMMRKAIKDH 255
SLRG ++VLMGKNTMMRKAI+ H
Sbjct: 46 SLRGKAVVLMGKNTMMRKAIRGH 68
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 147 bits (356), Expect = 4e-34
Identities = 90/187 (48%), Positives = 115/187 (61%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 434
L+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP V +PA NT
Sbjct: 69 LENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNT 128
Query: 435 GLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLV 614
GLGPEKTSFFQAL I TKIS+GTIE + ++ + S+GLV
Sbjct: 129 GLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Query: 615 VKQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPHFHSP 794
++QV+D+G+ + DI E++ F G + NVA++ + G P PH
Sbjct: 189 IQQVFDNGSIY-NPEVLDI-TEETLHSRFLEG-VRNVASVCLQI-GYPTVA-SVPH-SII 242
Query: 795 NGFQRNL 815
NG++R L
Sbjct: 243 NGYKRVL 249
Score = 119 bits (286), Expect = 1e-25
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL* 232
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR K
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 CAKPSKTTGQQSSPRETVATH-QGQRWLRVHXXXXXXXXXQTVGEQSPGSSSSRCHCPIV 409
K + + + E + H +G + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 410 XXXXXXXXXXXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLNI 589
+ F + + +G I++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 590 SPF 598
SPF
Sbjct: 181 SPF 183
Score = 42.3 bits (95), Expect = 0.016
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 187 SLRGSSIVLMGKNTMMRKAIKDH 255
SLRG ++VLMGKNTMMRKAI+ H
Sbjct: 46 SLRGKAVVLMGKNTMMRKAIRGH 68
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 115 bits (276), Expect = 2e-24
Identities = 68/159 (42%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 443
N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 74 NTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLD 133
Query: 444 PEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLVVKQ 623
P +TSFFQ L+IPTKI+KGT+E T ++ + SYGLVV+
Sbjct: 134 PSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQS 193
Query: 624 VYDSGNYFCT*NFWDIKPEDSSVPSFQAG-SLLNVAALS 737
VYD+G+ F D+ ED V F +G S++ AL+
Sbjct: 194 VYDNGSVFSP-EVLDL-TEDQLVEKFASGISMVTSLALA 230
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 184
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIR 44
Score = 39.9 bits (89), Expect = 0.083
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
KG II V ++K GDKVG+SEA LL L I PF
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPF 185
Score = 37.1 bits (82), Expect = 0.59
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 190 LRGSSIVLMGKNTMMRKAIKDH 255
LRG S+VLMGKNTMM+++++ H
Sbjct: 47 LRGDSVVLMGKNTMMKRSVRIH 68
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 113 bits (273), Expect = 4e-24
Identities = 72/173 (41%), Positives = 98/173 (56%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 443
N A LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 75 NQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLD 134
Query: 444 PEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLVVKQ 623
P +TSFFQ L+IPTKI+KGT+E T ++ + SYGLVV+
Sbjct: 135 PSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVES 194
Query: 624 VYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPH 782
VYD+G+ F ++ ED V F AG + + ALS + P APH
Sbjct: 195 VYDNGSVF-NPEVLNL-TEDDLVEKFAAGVSM-ITALSLAI-SYPTVA-AAPH 242
Score = 42.3 bits (95), Expect = 0.016
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 68 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 184
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIR 45
Score = 39.9 bits (89), Expect = 0.083
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
KG II V ++K GDKVG+SEA LL L I PF
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPF 186
Score = 37.1 bits (82), Expect = 0.59
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 190 LRGSSIVLMGKNTMMRKAIKDH 255
LRG S+VLMGKNTMM+++++ H
Sbjct: 48 LRGDSVVLMGKNTMMKRSVRIH 69
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 108 bits (260), Expect = 2e-22
Identities = 57/141 (40%), Positives = 85/141 (60%)
Frame = +3
Query: 216 GKKHYDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 395
GK ++ + + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 396 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFS 575
IAP V++PA +TGL P +T+F QAL+I +KI+KG IE ++ ++ + +
Sbjct: 123 IAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLL 182
Query: 576 TC*TSLHSSYGLVVKQVYDSG 638
YG V+ VYD+G
Sbjct: 183 QKLKINPFKYGAVIDVVYDNG 203
Score = 55.2 bits (127), Expect = 2e-06
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 1/183 (0%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL* 232
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR K
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 233 CAKPSKTTGQQSSPRETVATH-QGQRWLRVHXXXXXXXXXQTVGEQSPGSSSSRCHCPIV 409
K K + E + H +G + ++P + + P
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 410 XXXXXXXXXXXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLNI 589
+ F+ + + KG I ++ ++K G+KVG S+A LL L I
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKI 187
Query: 590 SPF 598
+PF
Sbjct: 188 NPF 190
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 95.5 bits (227), Expect = 2e-18
Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLG 443
P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G IAP+ V IP TG+
Sbjct: 73 PQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMD 132
Query: 444 PEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*T--SLHSSYGLVV 617
P TSF ++L I TKI KG IE + + + E + +T +++ SYG+ V
Sbjct: 133 PSHTSFLESLGISTKIVKGQIE---IQEHVHLIKQGEKVTASSATLLRKFNMNPSYGVDV 189
Query: 618 KQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALS 737
+ VYD G + DI ED + F G + NVAALS
Sbjct: 190 RTVYDDGVIYDA-KVLDITDED-ILEKFSKG-VSNVAALS 226
Score = 46.8 bits (106), Expect = 7e-04
Identities = 47/185 (25%), Positives = 64/185 (34%), Gaps = 2/185 (1%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL* 232
M + K K Y K+ L+ +Y K IV DNVGS QM +R + K
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 233 CAKPSKTTGQQSSPRETVATHQGQRWLRVHXXXXXXXXXQTVGEQSPGSSSSRCH--CPI 406
K Q E + V + + S +R PI
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 407 VXXXXXXXXXXXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLN 586
FL S + KG I VH++K G+KV AS ATLL N
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFN 180
Query: 587 ISPFF 601
++P +
Sbjct: 181 MNPSY 185
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 92.7 bits (220), Expect = 1e-17
Identities = 69/187 (36%), Positives = 98/187 (52%)
Frame = +3
Query: 198 LQYRAHGKKHYDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 377
++ RA KK A ++ + L N +KLL GN +FT ++ + L +++VQA
Sbjct: 63 VERRAEDKK---ASAYDKLLYNTCIEKKLLC---GNTALIFTNEEIPVITAVLDKHRVQA 116
Query: 378 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLEL 557
PAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+E + S R++
Sbjct: 117 PARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDN 176
Query: 558 LKPPFSTC*TSLHSSYGLVVKQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALS 737
Y + V+ V+D G F D+ D V + + NVAALS
Sbjct: 177 STATLLQKLDISPFYYQVEVQSVWDRGMLFLR---EDLSITDDVVEKYLLEGISNVAALS 233
Query: 738 FGLFGIP 758
G GIP
Sbjct: 234 LGA-GIP 239
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFF 601
KG I++D +L GD+V S ATLL L+ISPF+
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFY 191
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 86.6 bits (205), Expect = 7e-16
Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 447 EKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLH---SSYGLVV 617
++T+FFQ L+IPTKI+K IE S +T E + + L+ SY L V
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEIS---ADKQIITEGEKVGSNEAALLQKLNINPFSYKLSV 207
Query: 618 KQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPH 782
V+D+GN + DI E S + S++ + NVA++S GIP APH
Sbjct: 208 AHVFDNGNVYGP-GVLDITSE-SIIESYKR-VISNVASVSLE-SGIPTRA-SAPH 257
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 518 DVHILKPGDKVGASEATLLNMLNISPF 598
D I+ G+KVG++EA LL LNI+PF
Sbjct: 175 DKQIITEGEKVGSNEAALLQKLNINPF 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 184
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACR 44
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 81.0 bits (191), Expect = 4e-14
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 452
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 453 TSFFQALSIPTKISKGTIE 509
FF AL IPTKI KG I+
Sbjct: 153 IQFFHALQIPTKIEKGQIQ 171
Score = 41.9 bits (94), Expect = 0.021
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 184
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIR 44
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
KG I D +LK G KVG S+A LL L PF
Sbjct: 167 KGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPF 201
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 79.0 bits (186), Expect = 1e-13
Identities = 62/184 (33%), Positives = 89/184 (48%)
Frame = +3
Query: 231 DAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 410
D + + P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 411 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TS 590
V + TG+ P +TSFFQAL I TKI KG I+ ++ +
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGV 190
Query: 591 LHSSYGLVVKQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCF 770
S+GL VK VYD+G+ + + D + F G + N+AA+S L GIP
Sbjct: 191 KPFSFGLKVKNVYDNGSVYSA-EVLKL-TNDILLGKFMNG-VRNIAAMSLTL-GIPT-AA 245
Query: 771 QAPH 782
APH
Sbjct: 246 SAPH 249
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
KG I+N++H++ KVG SEA LL L + PF
Sbjct: 159 KGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPF 193
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 184
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLR 37
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 75.8 bits (178), Expect = 1e-12
Identities = 59/187 (31%), Positives = 91/187 (48%)
Frame = +3
Query: 258 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 437
D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 438 LGPEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLVV 617
+ P +TSF Q L I TKI++G I+ ++ + +YGL
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEP 188
Query: 618 KQVYDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPHFHSPN 797
K +YD+G + I ED + F+ G + N+AA+S + G P PH N
Sbjct: 189 KIIYDAGACYSP----SISEED-LINKFKQG-IFNIAAISLEI-GYPTVA-SIPH-SVMN 239
Query: 798 GFQRNLL 818
F +NLL
Sbjct: 240 AF-KNLL 245
Score = 57.2 bits (132), Expect = 5e-07
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 1/174 (0%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXRYVAPVSCSWEKTL*CAKPSKTTG 259
K + K +L Y K + AD VGS Q+Q+IR + K K +
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 260 QQSSPRETVATHQGQRWLRVHXXXXXXXXXQTVGEQSPGS-SSSRCHCPIVXXXXXXXXX 436
+ + T+ Q + + + Q G+ + + P
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 437 XXXXENLFLPSSFHPYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
+ FL + +G I+N+VHI+K G KVGASEATLL LNI PF
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPF 182
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 74.5 bits (175), Expect = 3e-12
Identities = 40/80 (50%), Positives = 46/80 (57%)
Frame = -1
Query: 505 IVPFEILVGMERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 326
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 325 RVNTKPTLPLMCGNSFSRAG 266
V TKPTLPL GN+FS++G
Sbjct: 61 LVKTKPTLPLTKGNNFSKSG 80
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 447 EKTSFFQALSIPTKISKGTIE 509
+ +FF ALSI TKI KG IE
Sbjct: 151 SQINFFHALSISTKIQKGQIE 171
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
KG I +V + G K+G SE +LL +NI PF
Sbjct: 167 KGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPF 201
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 63.3 bits (147), Expect(2) = 2e-11
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Frame = +3
Query: 219 KKHYDAQSHQRP----LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 371
K+ Y HQ+ L+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 683 KEIYPGSIHQQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 28.7 bits (61), Expect(2) = 2e-11
Identities = 43/117 (36%), Positives = 55/117 (47%)
Frame = +3
Query: 468 ALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLVVKQVYDSGNYF 647
ALSIP KISKGTIE + + +LK G ++QVY G+ F
Sbjct: 738 ALSIPIKISKGTIEI---------INDVPILKS-------------GDKIEQVY--GSIF 773
Query: 648 CT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGLFGIPNYCFQAPHFHSPNGFQRNLL 818
+ DIKPED FQ G + N+A +S + G P PH + GF RNLL
Sbjct: 774 SP-DILDIKPEDLRA-KFQVG-VANLAGVSLEI-GYPTLA-SVPH-NIAIGF-RNLL 823
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 70.9 bits (166), Expect = 4e-11
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 452
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP++
Sbjct: 76 LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQ 135
Query: 453 TSFFQALSIPTKISKGTIE 509
F+ AL I TKI+KG IE
Sbjct: 136 HGFYAALGIDTKINKGKIE 154
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 494 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFF 601
KG I+N V+++K GD V S ATLL L I PFF
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFF 185
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 68.9 bits (161), Expect = 2e-10
Identities = 48/160 (30%), Positives = 81/160 (50%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P L + +KG+V FVF +G+ +++ + EN +A A+ G +A V + + TG+ P
Sbjct: 95 PELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTP 154
Query: 447 EKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSSYGLVVKQV 626
+KTS+FQAL I TKI+KG +E + Y S ++ + Y + + Q+
Sbjct: 155 DKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQI 214
Query: 627 YDSGNYFCT*NFWDIKPEDSSVPSFQAGSLLNVAALSFGL 746
Y+ G + + + DI ED A S + A+L G+
Sbjct: 215 YEDGVIYDS-SLIDIGEEDIFTSLRNAISTVAAASLGAGV 253
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 64.9 bits (151), Expect = 3e-09
Identities = 35/83 (42%), Positives = 41/83 (49%)
Frame = -3
Query: 509 FNSTL*NFGRDGKSLEERGFLWTEAGVVGGNDD*QWGNGTGTSWSLDFVLQQFVTDLNEV 330
FN T N G + +SLEER W GV G N D WGN T + WS + V D+ +
Sbjct: 174 FNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQG 233
Query: 329 SAGEHEANVALDVWQQFLEGWIV 261
GE E NV LD QQ W V
Sbjct: 234 IVGEDETNVTLDERQQLFVVWEV 256
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 63.3 bits (147), Expect = 8e-09
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +3
Query: 177 RSAFATWLQYRAHGKKHYDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 356
R +F WL R + + ++ H NP L+P + GNVG + T+GDL EV ++
Sbjct: 586 RVSFLVWLPKRLFSQ--HSSRLHAEKT-GNPVFLNLVPLLVGNVGLISTKGDLKEVDKEV 642
Query: 357 LENKVQAPARPGAIAPLSVVIPAHNTGL 440
+ KV APAR G ++ + V++P NTGL
Sbjct: 643 AKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 246 QRPLDNN--PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 419
Q+ L+N+ P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+
Sbjct: 64 QKALENSDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVV 123
Query: 420 PAHNTGL--GPEKTSFFQALSIPTKISKGTI 506
PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 124 PAKNTGIAPGPMLTEFKEA-GIPTKIDQGTI 153
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 QRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 425
+ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+P
Sbjct: 78 EEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPE 137
Query: 426 HNTGLGPEK-TSFFQALSIPTKISKGTI 506
T P S Q +P +I G +
Sbjct: 138 GPTPFEPGPIVSELQQAGLPAQIQDGKV 165
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 434
L N+ ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 68 LKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLT 127
Query: 435 GLGPEKTSFFQALSIPTKISKGTIESSTMY 524
+ P+ FQ+L+IPTKI KG IE T +
Sbjct: 128 NISPDGIGIFQSLNIPTKILKGQIEIITNF 157
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 479 PYQNFKGYY*IINDVHILKPGDKVGASEATLLNMLNISPFF 601
P + KG II + +L+ G K+ +EATLL LNI PF+
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFY 183
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 440
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.5 bits (140), Expect = 6e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 440
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P
Sbjct: 75 PGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSP 134
Query: 447 EKTSFFQALSIPTKISKGTIE 509
AL+I KI KGTIE
Sbjct: 135 NDIKILHALNIQCKIFKGTIE 155
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 491 FKGYY*IINDVHILKPGDKVGASEATLLNMLNISPF 598
FKG I + ++ G KVGASEA +LN+L I PF
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPF 185
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 59.7 bits (138), Expect = 1e-07
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 447 EK-TSFFQALSIPTKISKG--TIESST 518
QAL IP +I KG TI+ T
Sbjct: 134 GPIVGQMQALGIPARIEKGKVTIQKDT 160
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 440
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 441 GPEKTSFFQALSIPTKISKGTI 506
GP T F +A IPTKI +GTI
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTI 139
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 470
++G VGF FT + EV + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 471 LSIPTKISKGTI 506
L IPT++ +G I
Sbjct: 150 LKIPTRVQEGKI 161
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 53.2 bits (122), Expect = 8e-06
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 452
+E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V+PA +T P
Sbjct: 71 VEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGP 130
Query: 453 -TSFFQALSIPTKISKGTI 506
Q + IP KI KG+I
Sbjct: 131 ILGELQQVGIPAKIDKGSI 149
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 443
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 444 PEKT-SFFQALSIPTKISKGTI 506
P S F L IPT+I G I
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKI 164
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 291 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 470
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 471 LSIPTKISKGTIE 509
L IPT+ISK +IE
Sbjct: 136 LGIPTRISKSSIE 148
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 449
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 450 KTSFFQALSIPTKISKGTI 506
S F L IPT++ +G+I
Sbjct: 140 MISNFNKLGIPTRVQEGSI 158
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 46.8 bits (106), Expect = 7e-04
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 300 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 476
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 477 IPTKISKGTI 506
I T + GTI
Sbjct: 153 IKTMVKGGTI 162
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 443
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 444 PEK-TSFFQALSIPTKISKGTI 506
P S +A+ IP I KG I
Sbjct: 138 PGPFLSELKAVGIPAAIDKGKI 159
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 452
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGP 137
Query: 453 -TSFFQALSIPTKISKGTIE 509
Q + +I +G+I+
Sbjct: 138 FVGELQTIGANARIQEGSIQ 157
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 321 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 494
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
Query: 495 KGTIE 509
G IE
Sbjct: 145 SGKIE 149
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 41.9 bits (94), Expect = 0.021
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 463 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 290
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 289 GNSFSRAG 266
G + G
Sbjct: 66 GTRLRKTG 73
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 40.3 bits (90), Expect = 0.063
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 449
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 450 KTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLH---SSYGLVVK 620
Q L IP+ I G + + V E++ P + L + GL +
Sbjct: 132 VVGELQNLGIPSGIDGGKVVVKQRKVA---VEEGEIVSPELADMLAKLEIYPITEGLDLC 188
Query: 621 QVYDSG 638
VYDSG
Sbjct: 189 AVYDSG 194
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 40.3 bits (90), Expect = 0.063
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 315 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 491
+FT + E+ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Query: 492 SKGTI 506
+I
Sbjct: 152 QGNSI 156
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 40.3 bits (90), Expect = 0.063
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 443
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 444 PEKTSFFQALSIPTKISKGTI 506
P S F L + TK+ G +
Sbjct: 138 P-ILSVFGKLKVQTKVQDGKV 157
>UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 619
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 568 GGFRSSNLVTGLQDVYIVDDSIVPFEILVGMERAWKKEV---FSGPRPVLWAGMTTDNGA 398
G R N TG DV V + ++P+ +L G+E+ W E+ ++ P +AG NGA
Sbjct: 513 GALRERNDSTGDNDVLKVYEKLLPYAVLFGLEKEWSNELSRYYTENSPDWYAGSGVFNGA 572
Query: 397 M 395
+
Sbjct: 573 V 573
>UniRef50_UPI0000E48534 Cluster: PREDICTED: similar to ankyrin
2,3/unc44; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ankyrin 2,3/unc44 -
Strongylocentrotus purpuratus
Length = 1255
Score = 37.5 bits (83), Expect = 0.44
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +1
Query: 211 LMGKNTMMRKAIKDHWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVP 390
L+GK + +A D WT + + + H A SC A+ L+ T Q V
Sbjct: 795 LIGKGADLNRADNDDWTRFRAASSNRHVDCAEFLSCQGAD--LKRTGYDGSTPLGSQSVD 852
Query: 391 VPLPHCQSSFPPTTPASVQRKPLS 462
P +SF T P+S +++P++
Sbjct: 853 TEYPETSTSFKLTPPSSPRKRPIA 876
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 37.1 bits (82), Expect = 0.59
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 425
L+KL ++ G+VG +FT D E++D + AR G++A ++ IP+
Sbjct: 89 LDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 36.7 bits (81), Expect = 0.78
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 434
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 435 GLGP-EKTSFFQALSIPTKISKGTI 506
P Q+ IP I G +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKV 155
>UniRef50_Q4Q8X5 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2781
Score = 36.3 bits (80), Expect = 1.0
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Frame = +1
Query: 139 RGCR*RGLATDAADPXSLRGSSIVLMGKNTMMRKAIKDHWTTIQPSRNCCHTSRA--TLA 312
R CR G AA P + R + V G M + + + P+R A L
Sbjct: 216 RSCRGGGSCFSAAHPTTSRCGASVHTGTKDEMADTLTEKVDAVTPTRESLADMPALPALE 275
Query: 313 SCSPAETSLRSVTNCWRTKSRL-QLVPVPLPHCQSSF---PPTTPASVQRKPLSSKLFPS 480
S + + LR ++ + RL + P H +F P TPA + ++P L+P
Sbjct: 276 SAADLDAHLRCISRQYARLDRLLRGYSTPDDHDVVAFRVVPTETPAPLPQEPAPPCLYPQ 335
Query: 481 LPKFQRVL 504
P F V+
Sbjct: 336 PPPFTSVV 343
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 467
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 468 ALSIPTKISKGTIE 509
+ IP I G ++
Sbjct: 140 QVGIPAAIEGGKVK 153
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 35.5 bits (78), Expect = 1.8
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +3
Query: 249 RPLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 413
R L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 414 --VIPAHN--TGLGPEKTSFFQALSI 479
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_A2QSL8 Cluster: Contig An08c0280, complete genome; n=1;
Aspergillus niger|Rep: Contig An08c0280, complete genome
- Aspergillus niger
Length = 871
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 126 QNVSSWVPITWARNRCSRSAFATWLQYRAHGKKHYD 233
Q+ S W P+TWA R + LQYRA YD
Sbjct: 819 QDSSGWTPLTWASERGHEAVAKLLLQYRADPNSGYD 854
>UniRef50_UPI00005852CD Cluster: PREDICTED: similar to solute
carrier family 30 (zinc transporter), member 6; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
solute carrier family 30 (zinc transporter), member 6 -
Strongylocentrotus purpuratus
Length = 570
Score = 34.3 bits (75), Expect = 4.1
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +1
Query: 223 NTMMRKAIKDHWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLP 402
N + + IKD WT I P +SR TL +P ++ +S + + L
Sbjct: 397 NILTIQIIKDEWTRINPVSTTIGSSRTTLQDFTPGVSTPKSQFKSVASSLPAHMTNNTLY 456
Query: 403 HCQSSFPPTTPASVQRKPLSSKL 471
+ + PT P Q P + L
Sbjct: 457 GAGNPYSPTPPLRAQSTPYGTPL 479
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 34.3 bits (75), Expect = 4.1
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 267 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 446
P L L ++KG +FT+ E+R++L + RPGA A +V I + P
Sbjct: 81 PKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFP 140
Query: 447 EKTS-FFQALSIPTKISKGTIESSTMY 524
+ L +P K+ +G + Y
Sbjct: 141 HTMEPVLRQLGMPVKLVRGVVHLERDY 167
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 34.3 bits (75), Expect = 4.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 452
++L ++ G + V+T + ++ L K + A+ G IAP +VIP T P
Sbjct: 82 KELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPL 141
Query: 453 TSFFQALSIPTKISKGTI 506
FQ + IP I G +
Sbjct: 142 VGEFQQVGIPAGIEGGKV 159
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 33.9 bits (74), Expect = 5.5
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 449
L K +KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 450 KTSFFQALSIPTKISKGTI 506
+ L +PTK+ KG I
Sbjct: 150 MEPQLRKLGLPTKLDKGVI 168
>UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like
protein precursor; n=1; Mycobacterium gilvum
PYR-GCK|Rep: Putative outer membrane adhesin like
protein precursor - Mycobacterium gilvum PYR-GCK
Length = 567
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 485 GRDGKSLEERGFLWTEAGVVGGNDD*QWGNGTGTS 381
GR G + RGF+W G + D WG+ GTS
Sbjct: 488 GRGGSQMAARGFVWRTDGNLQNGDIVVWGSSAGTS 522
>UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
mKIAA0909 protein - Danio rerio
Length = 930
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 415 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSSGL 248
T ++G G + S S S +S+ P+ PT+ L GN F R GL + L
Sbjct: 197 TPEDGGRVEETVGVASPCSASSSSSSSSPPQTQRAPTISLSNGNGFQRGGLATVAL 252
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 255 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 347
L NN L+KLLP I+G ++ RGDL E++
Sbjct: 832 LANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q4RSU0 Cluster: Chromosome 12 SCAF14999, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 12
SCAF14999, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 789
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +1
Query: 244 IKDHWT-TIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSF 420
+ D WT ++Q + C T CSPA +S T S+ +P H
Sbjct: 183 LNDMWTISLQDREHACWEEARTRCLCSPARAEPKSPTTSSSLNSKATXTRIPTEHLLRGS 242
Query: 421 PP 426
PP
Sbjct: 243 PP 244
>UniRef50_Q1Q8Y0 Cluster: CheA signal transduction histidine kinases;
n=2; Psychrobacter|Rep: CheA signal transduction
histidine kinases - Psychrobacter cryohalolentis (strain
K5)
Length = 2301
Score = 33.1 bits (72), Expect = 9.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 177 RSAFATWLQYRAHGKKHYDAQSHQRPLDNNPALEKLLPHI 296
R+ + WLQ H H D SH + L+N+ A+++ L I
Sbjct: 963 RALYNQWLQPAKHTPSHIDLNSHIQDLENDEAIDRTLQTI 1002
>UniRef50_A6QSZ3 Cluster: Predicted protein; n=2; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 647
Score = 33.1 bits (72), Expect = 9.6
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 286 CHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQ-SSFPPTTPASVQRKPLS 462
C R + + P TS+ T + S L P PLP C SSFPP TP R
Sbjct: 77 CLPGRPNVVNPPPYSTSVSLQTQPMHSVS---LKPHPLPSCPPSSFPPCTPLQGSRSGQD 133
Query: 463 SKLFPSLPKFQRVLLNHQRCTHLEAR 540
L F +V + + LE++
Sbjct: 134 PAQVIVLNDFDKVFIKNGIAEGLESK 159
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,030,385,863
Number of Sequences: 1657284
Number of extensions: 23435733
Number of successful extensions: 71339
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 67080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71288
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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