Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30996
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    26   0.45 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  

>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 872 WLAFFQNSNPFVNQQPMAQKVSLKPIWRMEMRGL 771
           W  F +N NP  +++     V+ KP+ R EM  L
Sbjct: 468 WTNFAKNGNPNPSEENPLINVTWKPVTRNEMNFL 501


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
 Frame = -2

Query: 777 GPESNSWVSQIAQRKEQLHLANSQL-GNLARK----NPLV*CPRNFRCKNSSQNH 628
           G   NSW S I   K        QL  N+  K    N  V C R   CK++ Q H
Sbjct: 99  GSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMH 153


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 319 NTKPTLPLMCGNSFSRAGLLSSGL 248
           N KP +  +CG S++R   L + L
Sbjct: 246 NQKPNVCRICGKSYARPSTLKTHL 269


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 703 WKLGTEESSGLMSQKFQV 650
           W + T++ +GL   K+Q+
Sbjct: 361 WSIETDDFNGLSGTKYQI 378


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 86  NYFVKIIQLLDEYPKCF 136
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,653
Number of Sequences: 336
Number of extensions: 5641
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)