Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30995
         (858 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila melanogaste...    62   1e-08
UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep: CG1456...    60   5e-08
UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA...    50   6e-05
UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA...    43   0.009
UniRef50_Q2NG29 Cluster: Hypothetical membrane-spanning protein;...    35   2.3  
UniRef50_A6RMI5 Cluster: Predicted protein; n=1; Botryotinia fuc...    35   3.0  
UniRef50_Q17EQ7 Cluster: Myosin I, putative; n=2; Aedes aegypti|...    34   5.3  
UniRef50_Q1IPH5 Cluster: Magnesium and cobalt transport protein ...    33   7.0  
UniRef50_Q9VID9 Cluster: CG8677-PA; n=4; Drosophila melanogaster...    33   7.0  
UniRef50_UPI000155C86C Cluster: PREDICTED: similar to LOC443674 ...    33   9.2  
UniRef50_A6P1E1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_Q55BW4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila
           melanogaster|Rep: CG33290-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 171

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 24/48 (50%), Positives = 38/48 (79%)
 Frame = +1

Query: 238 NNAKTSIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHV 381
           +N++  I+A GD + ++RL +LPVD+QPFW +N+QA+EA R NP+ +V
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPRPNV 159


>UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep:
           CG14567-PA - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 60.5 bits (140), Expect = 5e-08
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +1

Query: 256 IEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHV 381
           I+A+GD E ++ LS+LPV++QPFWFIN+QA+EAHR + + +V
Sbjct: 137 IDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHRNSSRPNV 178


>UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33290-PA - Apis mellifera
          Length = 138

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 17/43 (39%), Positives = 30/43 (69%)
 Frame = +1

Query: 256 IEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQ 384
           ++A G++ L++R+   P +KQPFW+INWQ ++ HR + +   Q
Sbjct: 82  VDALGNINLVNRIKTWPREKQPFWYINWQQIQEHRGDSKNRAQ 124


>UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14567-PA - Tribolium castaneum
          Length = 135

 Score = 43.2 bits (97), Expect = 0.009
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +1

Query: 244 AKTSIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGF 399
           A+  ++A GD +L+DRL++ P + +PFW +N   +EA R N Q +V+  +GF
Sbjct: 58  ARIPVDARGDGQLVDRLNQWPREHRPFWLLNADHIEASR-NGQ-NVETRSGF 107



 Score = 38.7 bits (86), Expect = 0.19
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
 Frame = +2

Query: 140 QRPSFAGSRPIGFPDTPNRI-------TVAVGDRFGDDDST 241
           QRP++AGSRPIG PD  +R        TVAV +R G+D +T
Sbjct: 17  QRPTYAGSRPIGRPDLASRFKDPEEQSTVAVYNRVGEDGTT 57


>UniRef50_Q2NG29 Cluster: Hypothetical membrane-spanning protein;
           n=1; Methanosphaera stadtmanae DSM 3091|Rep:
           Hypothetical membrane-spanning protein - Methanosphaera
           stadtmanae (strain DSM 3091)
          Length = 727

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = -2

Query: 752 KKYNNFREFGMKTN-KYIYRDVFASSFCCCR*IMIYEPLEAVGFSRDHTFRAGFVCNGAR 576
           K  N  +    KTN    Y D   +S CC   I + +    + F RD ++RA       +
Sbjct: 87  KDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQVSDKESIISFRRDSSYRATITIEKTK 146

Query: 575 WFNIGVVR 552
           W+   + R
Sbjct: 147 WYGTNITR 154


>UniRef50_A6RMI5 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 119

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 313 KQPFWFINWQALEAHRKNPQTHVQRPNGFIDPI 411
           +  FW  NWQA+E +  +     Q PNGF D I
Sbjct: 7   RNSFWMNNWQAVECYTVSNNMKPQHPNGFGDDI 39


>UniRef50_Q17EQ7 Cluster: Myosin I, putative; n=2; Aedes
           aegypti|Rep: Myosin I, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 500

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 336 LASLRSAQEEPTNSRAEA*RIHRSHHAQSKRCYRPSKLKRSVVSIEQRVIELRTDQ*LVQ 515
           +A ++S +E+  NSRA   R+H     + K   R S+   + +  ++ + E++ ++  V+
Sbjct: 114 MAKMKSLEEKSKNSRA---RVHYKKFTRGKDLSRASEKDLANIFGKKSLDEVKNNKLAVE 170

Query: 516 -SNANAAIGDRFDSDDTNVKPTSTV 587
            ++    + D+ DSD+TNV   +T+
Sbjct: 171 EADDKDDVEDKSDSDETNVLGLTTI 195


>UniRef50_Q1IPH5 Cluster: Magnesium and cobalt transport protein
           CorA; n=2; Acidobacteria|Rep: Magnesium and cobalt
           transport protein CorA - Acidobacteria bacterium (strain
           Ellin345)
          Length = 291

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 117 PHLHWCCVSDPPSPDQGRLDSRIHLTE 197
           PHL W  +SDP SP+   L  R HL E
Sbjct: 6   PHLAWYDISDPASPELDELARRFHLHE 32


>UniRef50_Q9VID9 Cluster: CG8677-PA; n=4; Drosophila
           melanogaster|Rep: CG8677-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 2759

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 22/114 (19%), Positives = 49/114 (42%)
 Frame = +3

Query: 135 CVSDPPSPDQGRLDSRIHLTESP*LSETDLAMTTQQRQDFDRSERRLRVDR*TEQAACRQ 314
           C   PP P+Q   +    + + P  +  +L +  +  +  D+  ++++    ++      
Sbjct: 242 CHPKPPPPEQKEEEDDEEVGDEPEKTVPNLKIKLRSPEQEDQKSKKVKPLLISQAKLSSS 301

Query: 315 ATLLVHQLASLRSAQEEPTNSRAEA*RIHRSHHAQSKRCYRPSKLKRSVVSIEQ 476
           A+    +  S+      PT S+ E  + HR     +KR  +PS+ + +   IE+
Sbjct: 302 ASPAPTKKRSIEDVDSSPTASQEEQQKKHRPTLLDTKRIKKPSRYESTKDEIEE 355


>UniRef50_UPI000155C86C Cluster: PREDICTED: similar to LOC443674
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to LOC443674 protein - Ornithorhynchus anatinus
          Length = 367

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 353 RTGRTHKLTCRGLTDS*IPSCPVKTLLPPKQTQTQCRQY-----RAAGHRTPHRPVA 508
           R GR   L   GL    +PS P   L PP  T TQC+       R AGH  P RP A
Sbjct: 200 RRGRPGPLRS-GLRSPHVPSAPANALGPPP-TLTQCQGVPVNPRRVAGHPNPPRPAA 254


>UniRef50_A6P1E1 Cluster: Putative uncharacterized protein; n=1;
            Bacteroides capillosus ATCC 29799|Rep: Putative
            uncharacterized protein - Bacteroides capillosus ATCC
            29799
          Length = 1348

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
 Frame = +3

Query: 264  ERRLRVDR*TEQAAC---RQATLLVHQLASLRSAQEEPTNSRAEA*RIHRSHHAQSKRCY 434
            ERRL  +R ++QA     RQ   L   L  +R+  EE      ++   +++  +    C+
Sbjct: 802  ERRLEQERASKQAVAQLERQTRELSMGLPYMRT--EEAYEEALDSVDSYQALMSTLTICH 859

Query: 435  RPSKLK-RSVVSIEQRVIELRTDQ*LVQSNANAAIGDRFDSDDTNVKPTSTVANKP 599
                   R+VVS E R+ ELR DQ   QS +NA I  + D   + ++       +P
Sbjct: 860  SKFIFAARTVVSTEDRIAELR-DQASAQSKSNAQIQKQIDVSQSRIQAIQAFLEQP 914


>UniRef50_Q55BW4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 139

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 652 IIIQRQQQKLDAKTSR*IYLFVFIPNSRKLLYFL--KTNPENY 774
           +II    Q+LD   +R IY+FVF  + +  ++FL  K NP NY
Sbjct: 4   VIIINSSQELDFYLNRSIYVFVFYSSLKCNIFFLKKKKNPGNY 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,629,169
Number of Sequences: 1657284
Number of extensions: 16983670
Number of successful extensions: 44322
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 42415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44308
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)