BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30994 (745 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 193 9e-50 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 193 9e-50 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 193 9e-50 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 189 1e-48 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 189 1e-48 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 183 1e-46 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 181 5e-46 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 61 7e-10 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 61 9e-10 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 58 5e-09 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 58 5e-09 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 58 6e-09 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 58 8e-09 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 57 1e-08 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 57 1e-08 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 56 3e-08 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 4e-07 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 50 1e-06 At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 31 1.1 At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.4 At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 30 1.9 At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 29 3.3 At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 29 3.3 At3g22830.1 68416.m02877 heat shock transcription factor family ... 28 5.7 At2g41120.1 68415.m05079 expressed protein 28 5.7 At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 7.5 At3g22070.1 68416.m02785 proline-rich family protein contains pr... 28 7.5 At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 9.9 At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 9.9 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 193 bits (471), Expect = 9e-50 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 ++SS+TASLRFDGALNVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ A + P S HG +YRGDVVPKDVNAA+ TIKTKRTIQFV Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE + + + AF Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404 Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 VHW S L + EKDYEEVG Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 193 bits (471), Expect = 9e-50 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 ++SS+TASLRFDGALNVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ A + P S HG +YRGDVVPKDVNAA+ TIKTKRTIQFV Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE + + + AF Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404 Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 VHW S L + EKDYEEVG Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 193 bits (471), Expect = 9e-50 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 ++SS+TASLRFDGALNVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ A + P S HG +YRGDVVPKDVNAA+ TIKTKRTIQFV Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE + + + AF Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404 Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 VHW S L + EKDYEEVG Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 189 bits (461), Expect = 1e-48 Identities = 110/214 (51%), Positives = 129/214 (60%), Gaps = 10/214 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 I+SS+T SLRFDGA+NVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 IISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYA----PVISAAKAYHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ + P S HG +YRGDVVPKDVNAA+ TIKTKRT+QFV Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE + + + AF Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404 Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 VHW S L + EKDYEEVG Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436 Score = 111 bits (266), Expect = 6e-25 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 1/164 (0%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269 P IHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC+ Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322 Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATWPRFNVXXXXXXXX 446 P+ ++ + + + P PP P + Sbjct: 323 VVPKD-VNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNN 381 Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578 ++ +R+DHKFDLMYAKR SEAR DL Sbjct: 382 TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 189 bits (461), Expect = 1e-48 Identities = 110/214 (51%), Positives = 129/214 (60%), Gaps = 10/214 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 I+SS+T SLRFDGA+NVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 IISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYA----PVISAAKAYHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ + P S HG +YRGDVVPKDVNAA+ TIKTKRT+QFV Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE + + + AF Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404 Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 VHW S L + EKDYEEVG Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436 Score = 111 bits (266), Expect = 6e-25 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 1/164 (0%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269 P IHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC+ Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322 Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATWPRFNVXXXXXXXX 446 P+ ++ + + + P PP P + Sbjct: 323 VVPKD-VNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNN 381 Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578 ++ +R+DHKFDLMYAKR SEAR DL Sbjct: 382 TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 183 bits (446), Expect = 1e-46 Identities = 97/162 (59%), Positives = 113/162 (69%), Gaps = 9/162 (5%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181 ++SS+TASLRFDGALNVD+TEFQTNLVPYPR H S P + + H+ Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284 Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334 ++ A + P S HG +YRGDVVPKDVNAA+ TIKTKRTIQFV Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344 Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 460 DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 181 bits (440), Expect = 5e-46 Identities = 105/209 (50%), Positives = 123/209 (58%), Gaps = 6/209 (2%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHKR 184 +SS+T SLRFDGA+NVD+TEFQTNLVPYPR H S A+ + Sbjct: 235 ISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYAPVISSAKAYHEQFSVP 289 Query: 185 MLRAR--QPDGEMR---PPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 349 + +P M P + +YRGDVVPKDVN A+A IK KRTIQFVDWCPT Sbjct: 290 EITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPT 349 Query: 350 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHWXX 529 GFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE + + + AFVHW Sbjct: 350 GFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYV 409 Query: 530 XXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613 S L + EKDYEEVG Sbjct: 410 GEGMEEGEF--SEAREDLAALEKDYEEVG 436 Score = 104 bits (249), Expect = 7e-23 Identities = 62/164 (37%), Positives = 79/164 (48%), Gaps = 1/164 (0%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269 P IHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC+ Sbjct: 263 PRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGD 322 Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP-WCPEATWPRFNVXXXXXXXX 446 P+ ++ + + + P PP P + Sbjct: 323 VVPKD-VNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNN 381 Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578 ++ +R+DHKFDLMY+KR SEAR DL Sbjct: 382 TAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 61.3 bits (142), Expect = 7e-10 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 6/179 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166 +S +T SLRF G LN DL + NL+P+PR P + +P + Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293 Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346 D K M+ A P R + ++ RG + K+V+ I ++ K + FV+W P Sbjct: 294 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQILNVQNKNSSYFVEWIP 347 Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 K + PPT ++ A + N+T+I E + Q R+ AF+HW Sbjct: 348 NNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 398 Score = 46.0 bits (104), Expect = 3e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYL 312 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 60.9 bits (141), Expect = 9e-10 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 7/180 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166 +S +T SLRF G LN DL + NL+P+PR P + +P + Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293 Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 D K M+ A P G S ++RG + K+V+ I I+ K + FV+W Sbjct: 294 MWDSKNMMCAADPRHGRYLTAS-------AIFRGQMSTKEVDEQILNIQNKNSSYFVEWI 346 Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 P K + PP ++ A + N+T+I E + Q R+ AF+HW Sbjct: 347 PNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 398 Score = 46.0 bits (104), Expect = 3e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYL 312 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 58.4 bits (135), Expect = 5e-09 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 7/180 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR + G R S R +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292 Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 D K M+ A P G S ++RG + K+V+ + ++ K + FV+W Sbjct: 293 MWDSKNMMCAADPRHGRYLTAS-------AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345 Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 P K + PPT ++ A + N+T+I E + Q R+ AF+HW Sbjct: 346 PNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYL 311 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 58.4 bits (135), Expect = 5e-09 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 7/180 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR + G R S R +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292 Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 D K M+ A P G S ++RG + K+V+ + ++ K + FV+W Sbjct: 293 MWDSKNMMCAADPRHGRYLTAS-------AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345 Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 P K + PPT ++ A + N+T+I E + Q R+ AF+HW Sbjct: 346 PNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYL 311 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 58.0 bits (134), Expect = 6e-09 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 6/179 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR + G R S R +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292 Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346 D K M+ A P R + ++ RG + K+V+ + ++ K + FV+W P Sbjct: 293 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMLNVQNKNSSYFVEWIP 346 Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 K + PPT ++ A + N+T+I E + Q R+ AF+HW Sbjct: 347 NNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYL 311 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 57.6 bits (133), Expect = 8e-09 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 6/179 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR + G R S R +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292 Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346 D K M+ A P R + ++ RG + K+V+ + ++ K + FV+W P Sbjct: 293 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMINVQNKNSSYFVEWIP 346 Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 K + PPT ++ A + N+T+I E + Q R+ AF+HW Sbjct: 347 NNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 46.8 bits (106), Expect = 2e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 57.2 bits (132), Expect = 1e-08 Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 7/180 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR P + +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292 Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 D K M+ A P G S V+RG + K+V+ + I+ K + FV+W Sbjct: 293 MWDAKNMMCAADPRHGRYLTAS-------AVFRGKLSTKEVDEQMMNIQNKNSSYFVEWI 345 Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 P K + + P G ++ A + N+T+I E + Q R+ AF+HW Sbjct: 346 PNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 48.0 bits (109), Expect = 7e-06 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYL 311 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 56.8 bits (131), Expect = 1e-08 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 7/180 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR P + +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292 Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 D K M+ A P G S V+RG + K+V+ + ++ K + FV+W Sbjct: 293 MWDAKNMMCAADPRHGRYLTAS-------AVFRGKMSTKEVDEQMMNVQNKNSSYFVEWI 345 Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 P K + + P G ++ A + N+T+I E + Q R+ AF+HW Sbjct: 346 PNNVKSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 48.0 bits (109), Expect = 7e-06 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYL 311 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 55.6 bits (128), Expect = 3e-08 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 6/179 (3%) Frame = +2 Query: 5 VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166 +S +T LRF G LN DL + NL+P+PR + G R S R +P + Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292 Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346 D K M+ A P R + ++ RG + K+V+ + ++ K + FV+W P Sbjct: 293 MWDSKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMINVQNKNSSYFVEWIP 346 Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523 K + + P G + A + N+T+I E + Q R+ AF+HW Sbjct: 347 NNVKSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 Score = 46.8 bits (106), Expect = 2e-05 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 90 PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242 P +HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYL 311 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 52.0 bits (119), Expect = 4e-07 Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 6/135 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV-----RASHLCREGLP*TAF 163 ++S+ T +LR+ G +N DL +L+P PR + L TG+ R +++ R+ Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294 Query: 164 RRRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 RR + + + +L + +G+V P V+ ++ I+ ++ + F+DW Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWG 354 Query: 344 PTGFKVGINYQPPTV 388 P +V ++ + P V Sbjct: 355 PASIQVALSKKSPYV 369 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 50.4 bits (115), Expect = 1e-06 Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 6/135 (4%) Frame = +2 Query: 2 IVSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV-----RASHLCREGLP*TAF 163 ++S+ T +LR+ G +N DL +L+P PR + L TG+ R +++ R+ Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294 Query: 164 RRRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343 RR + + + +L + +G+V P V+ ++ I+ ++ + F++W Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWG 354 Query: 344 PTGFKVGINYQPPTV 388 P +V ++ + P V Sbjct: 355 PASIQVALSKKSPYV 369 >At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein kinase, putative Length = 654 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +1 Query: 64 VPD*LGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 201 +P LG P S+S T LP +P S P P H S+PP Sbjct: 220 IPSALGGFP--SSSFSGNTLLCGLPLQPCATSSPPPSLTPHISTPP 263 >At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; Length = 698 Score = 30.3 bits (65), Expect = 1.4 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -1 Query: 376 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 272 LV DT+L TPVD ++ L G VH+ GY Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394 >At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 587 Score = 29.9 bits (64), Expect = 1.9 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +2 Query: 242 GLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 403 G L +G V D A T TK+ + DW P+ FK PP ++P D Sbjct: 302 GSLPTLQGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355 >At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1068 Score = 29.1 bits (62), Expect = 3.3 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 52 GPHRVPD*LGALPPVSTSHWSRTRQSSLPRR 144 G ++P+ + +PPV HW + SLP+R Sbjct: 569 GTLQIPEDMEYIPPVRLLHWQNYPRKSLPQR 599 >At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1068 Score = 29.1 bits (62), Expect = 3.3 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 52 GPHRVPD*LGALPPVSTSHWSRTRQSSLPRR 144 G ++P+ + +PPV HW + SLP+R Sbjct: 569 GTLQIPEDMEYIPPVRLLHWQNYPRKSLPQR 599 >At3g22830.1 68416.m02877 heat shock transcription factor family protein contains Pfam profile: PF00447 HSF-type DNA-binding domain Length = 406 Score = 28.3 bits (60), Expect = 5.7 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = +1 Query: 88 PPVSTSH-WSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 201 PP S+S+ +S + + PT S+P P H S PP Sbjct: 22 PPSSSSYLYSSSMAEAAINDPTTLSYPQPLEGLHESGPP 60 >At2g41120.1 68415.m05079 expressed protein Length = 261 Score = 28.3 bits (60), Expect = 5.7 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = -3 Query: 278 WVRRHHGTHTASHVLAMTGVAFHHLV-GGLEACVCDLGDG 162 W++ T T H + V FHHL + + +LG+G Sbjct: 103 WIQAEEPTRTLIHGILQCAVGFHHLFNNNHKGAMMELGEG 142 >At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1085 Score = 27.9 bits (59), Expect = 7.5 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 Query: 61 RVPD*LGALPPVSTSHWSRTRQSSLPRR 144 ++P+ + LPP+ HW R + SLP + Sbjct: 574 QIPEDMEYLPPLRLLHWDRYPRKSLPTK 601 >At3g22070.1 68416.m02785 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 178 Score = 27.9 bits (59), Expect = 7.5 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +1 Query: 55 PHRVPD*LGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 234 P+ P LG+ PP T S T S P P +N P P S +PP + P + Sbjct: 74 PNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPS---TPNPPPEFSPPPPDLD 130 Query: 235 ST 240 +T Sbjct: 131 TT 132 >At2g46530.2 68415.m05803 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding domain Length = 514 Score = 27.5 bits (58), Expect = 9.9 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +1 Query: 31 IRRRSECGPHRV-PD*LGALPPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASS 195 I+R ++ P + P AL P T S++++S + P +SF S SQ+H S+ Sbjct: 251 IQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESN 310 Query: 196 PPTR 207 P + Sbjct: 311 PSVK 314 >At2g46530.1 68415.m05802 transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related contains Pfam profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding domain Length = 601 Score = 27.5 bits (58), Expect = 9.9 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +1 Query: 31 IRRRSECGPHRV-PD*LGALPPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASS 195 I+R ++ P + P AL P T S++++S + P +SF S SQ+H S+ Sbjct: 338 IQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESN 397 Query: 196 PPTR 207 P + Sbjct: 398 PSVK 401 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,496,485 Number of Sequences: 28952 Number of extensions: 385804 Number of successful extensions: 1298 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1265 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1643603136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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