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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30994
         (745 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide...   193   9e-50
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id...   193   9e-50
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne...   193   9e-50
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne...   189   1e-48
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne...   189   1e-48
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide...   183   1e-46
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide...   181   5e-46
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden...    61   7e-10
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden...    61   9e-10
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near...    58   5e-09
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near...    58   5e-09
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t...    58   6e-09
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide...    58   8e-09
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden...    57   1e-08
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden...    57   1e-08
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden...    56   3e-08
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin...    52   4e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin...    50   1e-06
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote...    31   1.1  
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03...    30   1.4  
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ...    30   1.9  
At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR...    29   3.3  
At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR...    29   3.3  
At3g22830.1 68416.m02877 heat shock transcription factor family ...    28   5.7  
At2g41120.1 68415.m05079 expressed protein                             28   5.7  
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR...    28   7.5  
At3g22070.1 68416.m02785 proline-rich family protein contains pr...    28   7.5  
At2g46530.2 68415.m05803 transcriptional factor B3 family protei...    27   9.9  
At2g46530.1 68415.m05802 transcriptional factor B3 family protei...    27   9.9  

>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  193 bits (471), Expect = 9e-50
 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           ++SS+TASLRFDGALNVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++  A   +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE +     +      + AF
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404

Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
           VHW             S     L + EKDYEEVG
Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436


>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
           identical to tubulin alpha-2/alpha-4 chain SP|P29510
           GB:P29510 from [Arabidopsis thaliana]
          Length = 450

 Score =  193 bits (471), Expect = 9e-50
 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           ++SS+TASLRFDGALNVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++  A   +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE +     +      + AF
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404

Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
           VHW             S     L + EKDYEEVG
Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436


>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
           nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
           chain from [Arabidopsis thaliana]
          Length = 450

 Score =  193 bits (471), Expect = 9e-50
 Identities = 112/214 (52%), Positives = 132/214 (61%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           ++SS+TASLRFDGALNVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++  A   +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE +     +      + AF
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAF 404

Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
           VHW             S     L + EKDYEEVG
Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436


>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  189 bits (461), Expect = 1e-48
 Identities = 110/214 (51%), Positives = 129/214 (60%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           I+SS+T SLRFDGA+NVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 IISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYA----PVISAAKAYHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++      +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRT+QFV
Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE +     +      + AF
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404

Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
           VHW             S     L + EKDYEEVG
Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436



 Score =  111 bits (266), Expect = 6e-25
 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269
           P IHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC+     
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322

Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATWPRFNVXXXXXXXX 446
             P+     ++ +  +  +       P          PP   P     +           
Sbjct: 323 VVPKD-VNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNN 381

Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578
               ++ +R+DHKFDLMYAKR                SEAR DL
Sbjct: 382 TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425


>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  189 bits (461), Expect = 1e-48
 Identities = 110/214 (51%), Positives = 129/214 (60%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           I+SS+T SLRFDGA+NVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 IISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYA----PVISAAKAYHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++      +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRT+QFV
Sbjct: 285 QLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAF 514
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE +     +      + AF
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404

Query: 515 VHWXXXXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
           VHW             S     L + EKDYEEVG
Sbjct: 405 VHWYVGEGMEEGEF--SEAREDLAALEKDYEEVG 436



 Score =  111 bits (266), Expect = 6e-25
 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269
           P IHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC+     
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322

Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATWPRFNVXXXXXXXX 446
             P+     ++ +  +  +       P          PP   P     +           
Sbjct: 323 VVPKD-VNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNN 381

Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578
               ++ +R+DHKFDLMYAKR                SEAR DL
Sbjct: 382 TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425


>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 427

 Score =  183 bits (446), Expect = 1e-46
 Identities = 97/162 (59%), Positives = 113/162 (69%), Gaps = 9/162 (5%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHK 181
           ++SS+TASLRFDGALNVD+TEFQTNLVPYPR      H   S       P  +  +  H+
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRI-----HFMLSSYA----PVISAEKAFHE 284

Query: 182 RMLRARQPDGEMRPPSWQV-----HG----LLYVYRGDVVPKDVNAAIATIKTKRTIQFV 334
           ++  A   +    P S        HG       +YRGDVVPKDVNAA+ TIKTKRTIQFV
Sbjct: 285 QLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344

Query: 335 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 460
           DWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 345 DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386


>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
           identical to SP|P11139 Tubulin alpha-1 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  181 bits (440), Expect = 5e-46
 Identities = 105/209 (50%), Positives = 123/209 (58%), Gaps = 6/209 (2%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPRYPLPTGHVRASHLCREGLP*TAFRRRDHKR 184
           +SS+T SLRFDGA+NVD+TEFQTNLVPYPR      H   S          A+  +    
Sbjct: 235 ISSLTTSLRFDGAINVDITEFQTNLVPYPRI-----HFMLSSYAPVISSAKAYHEQFSVP 289

Query: 185 MLRAR--QPDGEMR---PPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 349
            +     +P   M    P   +      +YRGDVVPKDVN A+A IK KRTIQFVDWCPT
Sbjct: 290 EITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPT 349

Query: 350 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHWXX 529
           GFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE +     +      + AFVHW  
Sbjct: 350 GFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYV 409

Query: 530 XXXXXXXXXLRSPLGPGLPS-EKDYEEVG 613
                      S     L + EKDYEEVG
Sbjct: 410 GEGMEEGEF--SEAREDLAALEKDYEEVG 436



 Score =  104 bits (249), Expect = 7e-23
 Identities = 62/164 (37%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMCTVVT 269
           P IHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC+     
Sbjct: 263 PRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGD 322

Query: 270 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP-WCPEATWPRFNVXXXXXXXX 446
             P+     ++ +  +  +       P          PP   P     +           
Sbjct: 323 VVPKD-VNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNN 381

Query: 447 XXXXKLGARLDHKFDLMYAKRLSCXXXXXXXXXXXXXSEAR*DL 578
               ++ +R+DHKFDLMY+KR                SEAR DL
Sbjct: 382 TAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425


>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
           identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
           thaliana}
          Length = 447

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166
           +S +T SLRF G LN DL +   NL+P+PR         P     +       +P    +
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293

Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346
             D K M+ A  P    R   +     ++  RG +  K+V+  I  ++ K +  FV+W P
Sbjct: 294 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQILNVQNKNSSYFVEWIP 347

Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
              K  +   PPT         ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 348 NNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 398



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYL 312


>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
           identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166
           +S +T SLRF G LN DL +   NL+P+PR         P     +       +P    +
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293

Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
             D K M+ A  P  G     S        ++RG +  K+V+  I  I+ K +  FV+W 
Sbjct: 294 MWDSKNMMCAADPRHGRYLTAS-------AIFRGQMSTKEVDEQILNIQNKNSSYFVEWI 346

Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
           P   K  +   PP          ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 347 PNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 398



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYL 312


>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR +    G      R S   R   +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
             D K M+ A  P  G     S        ++RG +  K+V+  +  ++ K +  FV+W 
Sbjct: 293 MWDSKNMMCAADPRHGRYLTAS-------AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345

Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
           P   K  +   PPT         ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 346 PNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYL 311


>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR +    G      R S   R   +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
             D K M+ A  P  G     S        ++RG +  K+V+  +  ++ K +  FV+W 
Sbjct: 293 MWDSKNMMCAADPRHGRYLTAS-------AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345

Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
           P   K  +   PPT         ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 346 PNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYL 311


>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
           GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR +    G      R S   R   +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292

Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346
             D K M+ A  P    R   +     ++  RG +  K+V+  +  ++ K +  FV+W P
Sbjct: 293 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMLNVQNKNSSYFVEWIP 346

Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
              K  +   PPT         ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 347 NNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYL 311


>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
           identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
           thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
          Length = 449

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR +    G      R S   R   +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346
             D K M+ A  P    R   +     ++  RG +  K+V+  +  ++ K +  FV+W P
Sbjct: 293 MWDAKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMINVQNKNSSYFVEWIP 346

Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
              K  +   PPT         ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 347 NNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311


>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
           identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
           thaliana}
          Length = 444

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR         P     +       +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292

Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
             D K M+ A  P  G     S        V+RG +  K+V+  +  I+ K +  FV+W 
Sbjct: 293 MWDAKNMMCAADPRHGRYLTAS-------AVFRGKLSTKEVDEQMMNIQNKNSSYFVEWI 345

Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
           P   K  +      + P G    ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 346 PNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  LSV E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYL 311


>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
           identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
           thaliana}
          Length = 444

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPRYPL------PTGHVRASHLCREGLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR         P     +       +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292

Query: 167 RRDHKRMLRARQP-DGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
             D K M+ A  P  G     S        V+RG +  K+V+  +  ++ K +  FV+W 
Sbjct: 293 MWDAKNMMCAADPRHGRYLTAS-------AVFRGKMSTKEVDEQMMNVQNKNSSYFVEWI 345

Query: 344 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
           P   K  +      + P G    ++ A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 346 PNNVKSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  LSV E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYL 311


>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
           identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
 Frame = +2

Query: 5   VSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV----RASHLCRE-GLP*TAFR 166
           +S +T  LRF G LN DL +   NL+P+PR +    G      R S   R   +P    +
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 167 RRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 346
             D K M+ A  P    R   +     ++  RG +  K+V+  +  ++ K +  FV+W P
Sbjct: 293 MWDSKNMMCAADP----RHGRYLTASAMF--RGKMSTKEVDEQMINVQNKNSSYFVEWIP 346

Query: 347 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGSP*PQVRPHVRQAAFVHW 523
              K  +      + P G    +  A   + N+T+I E +     Q     R+ AF+HW
Sbjct: 347 NNVKSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 90  PGIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 242
           P +HF +V +AP+ S     +  L+V E+T   ++  N M   DPRHG+Y+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYL 311


>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
           (TUBG2) identical to  SP|P38558 Tubulin gamma-2 chain
           (Gamma-2 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV-----RASHLCREGLP*TAF 163
           ++S+ T +LR+ G +N DL     +L+P PR + L TG+      R +++ R+       
Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294

Query: 164 RRRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
           RR    + +              +   +L + +G+V P  V+ ++  I+ ++ + F+DW 
Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWG 354

Query: 344 PTGFKVGINYQPPTV 388
           P   +V ++ + P V
Sbjct: 355 PASIQVALSKKSPYV 369


>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
           (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
           (Gamma-1 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
 Frame = +2

Query: 2   IVSSITASLRFDGALNVDLTEFQTNLVPYPR-YPLPTGHV-----RASHLCREGLP*TAF 163
           ++S+ T +LR+ G +N DL     +L+P PR + L TG+      R +++ R+       
Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294

Query: 164 RRRDHKRMLRARQPDGEMRPPSWQVHGLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWC 343
           RR    + +              +   +L + +G+V P  V+ ++  I+ ++ + F++W 
Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWG 354

Query: 344 PTGFKVGINYQPPTV 388
           P   +V ++ + P V
Sbjct: 355 PASIQVALSKKSPYV 369


>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 654

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 64  VPD*LGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 201
           +P  LG  P  S+S    T    LP +P   S P P    H S+PP
Sbjct: 220 IPSALGGFP--SSSFSGNTLLCGLPLQPCATSSPPPSLTPHISTPP 263


>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
           PF03138: Plant protein family. The function of this
           family of plant proteins is unknown;
          Length = 698

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 376 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 272
           LV DT+L    TPVD ++  L      G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394


>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 587

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +2

Query: 242 GLLYVYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 403
           G L   +G  V  D  A   T  TK+ +   DW P+  FK      PP ++P  D
Sbjct: 302 GSLPTLQGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355


>At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1068

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 52  GPHRVPD*LGALPPVSTSHWSRTRQSSLPRR 144
           G  ++P+ +  +PPV   HW    + SLP+R
Sbjct: 569 GTLQIPEDMEYIPPVRLLHWQNYPRKSLPQR 599


>At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1068

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 52  GPHRVPD*LGALPPVSTSHWSRTRQSSLPRR 144
           G  ++P+ +  +PPV   HW    + SLP+R
Sbjct: 569 GTLQIPEDMEYIPPVRLLHWQNYPRKSLPQR 599


>At3g22830.1 68416.m02877 heat shock transcription factor family
           protein contains Pfam profile: PF00447 HSF-type
           DNA-binding domain
          Length = 406

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 88  PPVSTSH-WSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 201
           PP S+S+ +S +   +    PT  S+P P    H S PP
Sbjct: 22  PPSSSSYLYSSSMAEAAINDPTTLSYPQPLEGLHESGPP 60


>At2g41120.1 68415.m05079 expressed protein
          Length = 261

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 278 WVRRHHGTHTASHVLAMTGVAFHHLV-GGLEACVCDLGDG 162
           W++    T T  H +    V FHHL     +  + +LG+G
Sbjct: 103 WIQAEEPTRTLIHGILQCAVGFHHLFNNNHKGAMMELGEG 142


>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1085

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 61  RVPD*LGALPPVSTSHWSRTRQSSLPRR 144
           ++P+ +  LPP+   HW R  + SLP +
Sbjct: 574 QIPEDMEYLPPLRLLHWDRYPRKSLPTK 601


>At3g22070.1 68416.m02785 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 178

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +1

Query: 55  PHRVPD*LGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 234
           P+  P  LG+ PP  T   S T  S  P  P +N  P P S     +PP  +    P + 
Sbjct: 74  PNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPS---TPNPPPEFSPPPPDLD 130

Query: 235 ST 240
           +T
Sbjct: 131 TT 132


>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related contains Pfam
           profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
           domain
          Length = 514

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +1

Query: 31  IRRRSECGPHRV-PD*LGALPPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASS 195
           I+R ++  P  + P    AL P  T   S++++S     +   P  +SF S  SQ+H S+
Sbjct: 251 IQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESN 310

Query: 196 PPTR 207
           P  +
Sbjct: 311 PSVK 314


>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related contains Pfam
           profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
           domain
          Length = 601

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +1

Query: 31  IRRRSECGPHRV-PD*LGALPPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASS 195
           I+R ++  P  + P    AL P  T   S++++S     +   P  +SF S  SQ+H S+
Sbjct: 338 IQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESN 397

Query: 196 PPTR 207
           P  +
Sbjct: 398 PSVK 401


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,496,485
Number of Sequences: 28952
Number of extensions: 385804
Number of successful extensions: 1298
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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