Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30993
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 241 YDNGTLKCMLYKCTM*HYDLPFKLAHVQPPNDNKAVILSRIPIDKQHNNN 92
           +D  +L+C++        D+P  +    P  D+ + I    P +KQHN N
Sbjct: 192 FDRRSLRCVVPPTE--DCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFN 239


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 636 HLVFILVFFYLYIKFLFIP 580
           HL+F+L   Y  +  LF+P
Sbjct: 192 HLLFLLCLDYFTLHLLFLP 210



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 636 HLVFILVFFYLYIKFLFI 583
           HL+F+L  +Y  +   F+
Sbjct: 126 HLLFLLCIYYFVVPLFFL 143



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 636 HLVFILVFFYLYIKFLFI 583
           HL+F+L  +Y Y   + +
Sbjct: 278 HLLFLLCIYYFYCALIIL 295


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -1

Query: 494 QLNSSEPILISIQMSNDVISGATLTCLLYFLYLSCSTCIHV 372
           Q+ +S+ I I+ +    +  G  L+ + YF++L CS  +++
Sbjct: 370 QIGNSD-IAITGKNFFSITRGLILSFVDYFVFLLCSILVNI 409


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 634 FSFYSGIFLFIYKIPIY 584
           F  + G FL +  IPIY
Sbjct: 568 FLLFGGFFLNVSSIPIY 584


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 634 FSFYSGIFLFIYKIPIY 584
           F  + G FL +  IPIY
Sbjct: 568 FLLFGGFFLNVSSIPIY 584


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,660
Number of Sequences: 336
Number of extensions: 4891
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)