Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30991
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 110 NQIGAKSWEIISDEHGIDPTGAYHGDSDLQW 202
           N+I  + W +  D  G     AYHGD   QW
Sbjct: 911 NRIRNQRWIVNRDTSGATGPFAYHGD---QW 938


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -2

Query: 324 GRSVRKVQSEQSPWCRAPSRRGWPGHVLAAGGFIVVY--IDALH 199
           GRS   V   Q       S  G PG   A  GF+  Y   D LH
Sbjct: 764 GRSFELVNKTQFDIGAPASGGGTPGKYTAEAGFMSFYEICDFLH 807


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 661 LDGNWKNC 638
           LDG+WK C
Sbjct: 170 LDGDWKKC 177


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +3

Query: 549 LTELMNTFSSCYPSPKSCRTTISLNPYK 632
           L    N    C  S   CRT  SL P+K
Sbjct: 298 LNSAANPIIYCLFSTHFCRTLGSLPPFK 325


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 RKEAESCECLQGF 466
           RK AE C  LQGF
Sbjct: 240 RKTAEMCYKLQGF 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,557
Number of Sequences: 336
Number of extensions: 3466
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)