Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30991
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 122 3e-28
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 122 4e-28
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 121 5e-28
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 119 3e-27
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 98 5e-21
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 52 6e-07
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 47 2e-05
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 47 2e-05
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 4e-04
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 42 5e-04
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 42 5e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 32 0.39
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 31 0.68
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_52461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_52459| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.8
SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21) 29 3.6
SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21) 29 3.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.8
SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_39524| Best HMM Match : rve (HMM E-Value=9.1e-17) 28 6.4
SB_7045| Best HMM Match : rve (HMM E-Value=3.8e-22) 28 6.4
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 28 8.4
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 28 8.4
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 122 bits (294), Expect = 3e-28
Identities = 68/125 (54%), Positives = 77/125 (61%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV +
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 122
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
+ + + T S + + + +MNTF S PSPK T +
Sbjct: 123 EAESCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF-SVVPSPKVSDTVV 180
Query: 615 SLNPY 629
PY
Sbjct: 181 --EPY 183
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVH QAGQCGNQIGAK WE+ISDEHGIDPTG YHGDSDLQ
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ 43
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA+GGKYV
Sbjct: 42 LQLERINVYYNEATGGKYV 60
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 122 bits (293), Expect = 4e-28
Identities = 67/125 (53%), Positives = 77/125 (61%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
A+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV +
Sbjct: 276 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 335
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
+ + + T S + + + +MNTF S PSPK T +
Sbjct: 336 EAESCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF-SVVPSPKVSDTVV 393
Query: 615 SLNPY 629
PY
Sbjct: 394 --EPY 396
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/51 (84%), Positives = 44/51 (86%)
Frame = +2
Query: 47 YSSHK*NKMREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
YSS KMREIVH QAGQCGNQIGAK WE+ISDEHGIDPTG YHGDSDLQ
Sbjct: 206 YSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ 256
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA+GGKYV
Sbjct: 255 LQLERINVYYNEATGGKYV 273
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 121 bits (292), Expect = 5e-28
Identities = 68/125 (54%), Positives = 76/125 (60%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
A+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV +
Sbjct: 8 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 67
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
+ + + I KI + +MNTF S PSPK T +
Sbjct: 68 EAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIR-EEYPDRIMNTF-SVVPSPKVSDTVV 125
Query: 615 SLNPY 629
PY
Sbjct: 126 --EPY 128
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 119 bits (286), Expect = 3e-27
Identities = 64/125 (51%), Positives = 77/125 (61%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV +
Sbjct: 63 SVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRK 122
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
+ + + T S + + + +MNTF S PSPK T +
Sbjct: 123 EAESCDCIQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF-SIVPSPKVSDTVV 180
Query: 615 SLNPY 629
PY
Sbjct: 181 --EPY 183
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIV +QAGQCGNQIGAK WE+ISDEHGIDPTG YHGDSDLQ
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ 43
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA+GGKYV
Sbjct: 42 LQLERINVYYNEATGGKYV 60
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 98.3 bits (234), Expect = 5e-21
Identities = 41/54 (75%), Positives = 48/54 (88%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++
Sbjct: 19 SILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 419 DVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
DV+RKEAE+C+C+QG Q L EEYPDRI
Sbjct: 74 DVLRKEAENCDCMQGVQ-LIQALGGGTGSGLGTLILSKIREEYPDRI 119
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVH QAGQCGNQIGAK WE+ISDEHGIDPTG YHGDSDLQ
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ 43
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVF 344
AILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA+GGKYV
Sbjct: 42 LQLERINVYYNEATGGKYV 60
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD V
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLV 118
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 498 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 484
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 650 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 703
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 129 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
+RE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 636
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 563
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + + GQ G QIG WE+ EHGI P G D + + T
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 115
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 66.1 bits (154), Expect = 3e-11
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV 117
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 50
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 65.7 bits (153), Expect = 3e-11
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 65.3 bits (152), Expect = 5e-11
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+V
Sbjct: 65 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTV 118
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + + GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D V
Sbjct: 436 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIV 489
Score = 64.5 bits (150), Expect = 8e-11
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 869 AVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + I GQ G QIG WE+ EHGI P G D + + T
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNT 422
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE + + GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 855
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 64.5 bits (150), Expect = 8e-11
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 483 AVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ V
Sbjct: 50 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIV 103
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE V I GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 469
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 30 AVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHID 81
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V
Sbjct: 976 AVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVV 1029
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 288 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 55
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 43
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 43
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
VR G + +F PD + G+ A NN+A+GHYT G E +D
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHID 41
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHID 41
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + + GQ G QIG WE+ EHGI P G D + + T
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNT 51
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTTMKPPAAS 244
MRE + I GQ G QIG WE+ EHGI P G D ++T AS
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETAS 253
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 237 RQVRAPAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 371
+ ++A A+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGD 187
MRE + I GQ G QIG WE+ EHGI P G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+ VDLEP + P+ + G+ A NN+A+GHYT G + VD V
Sbjct: 65 AVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQV 108
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 348 QSGAGNNWAKGHYTEGAELVDS 413
Q+ A NNWAKG YTEGAEL+DS
Sbjct: 2 QNSAANNWAKGFYTEGAELMDS 23
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
+D +RK AE+C+ +QGFQ L EEYPDR+
Sbjct: 25 MDCIRKLAENCDTVQGFQ-IAHSLGGGTGSGLGSLLLSKIREEYPDRL 71
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 425 VRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
+RKEAE C+ +QGFQ L + EEYPDRI
Sbjct: 1 MRKEAEDCDAIQGFQ-LLHSLGGGTGSGLGTLILYHLQEEYPDRI 44
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKSWEIISDE 151
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 VRAPAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDS 413
+ A A+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 64 LNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDK 123
Query: 414 V 416
V
Sbjct: 124 V 124
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 31.1 bits (67), Expect = 0.90
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 131 WEIISDEHGIDPTG 172
WE+I++EHGIDP G
Sbjct: 2 WEVIAEEHGIDPDG 15
>SB_52461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 464 IPGGIHTIPLPFERRLN-*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANRV 288
+P GI + P F+RR+N I+ L + V ++ G G +E+E + D + + +R
Sbjct: 59 MPFGIKSAPEEFQRRINECIEGLPNIAAVHDDIIIYGTGETEEEAMACHDAALKDLLDRC 118
Query: 287 HGAGLQVD 264
L+++
Sbjct: 119 REHNLKLN 126
>SB_52459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 464 IPGGIHTIPLPFERRLN-*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANRV 288
+P GI + P F+RR+N I+ L + V ++ G G +E+E + D + + +R
Sbjct: 216 MPFGIKSAPEEFQRRINECIEGLPNIAAVHDDIIIYGTGETEEEAMACHDAALKDLLDRC 275
Query: 287 HGAGLQVD 264
L+++
Sbjct: 276 REHNLKLN 283
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 382 CPLAQLLPAPDCPKTKLSGRKICP 311
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 382 CPLAQLLPAPDCPKTKLSGRKICP 311
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 382 CPLAQLLPAPDCPKTKLSGRKICP 311
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21)
Length = 752
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 464 IPGGIHTIPLPFERRLN*IDE-LSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANRV 288
+P GI + P F+RR+N E L + V ++ G G +E+E + D + + +R
Sbjct: 379 MPFGIKSAPEEFQRRINECFEGLPNISAVHDDIIIYGTGGTEEEAMACHDAALKDLLDRC 438
Query: 287 HGAGLQVD 264
L+++
Sbjct: 439 REHNLKLN 446
>SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 887
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 464 IPGGIHTIPLPFERRLN*IDE-LSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANRV 288
+P GI + P F+RR+N E L + V ++ G G +E+E + D + + +R
Sbjct: 316 MPFGIKSAPEEFQRRINECFEGLPNISAVHDDIIIYGTGGTEEEAMACHDAALKDLLDRC 375
Query: 287 HGAGLQVD 264
L+++
Sbjct: 376 REHNLKLN 383
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 358 APDCPKTKLSGRKICPKGPERTESMVPGSKST 263
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 464 IPGGIHTIPLPFERRLN-*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANR 291
+P GI + P F+RR+N I+ L + V ++ G G +++E + D + ++ +R
Sbjct: 82 MPFGIKSAPEEFQRRINECIEGLPNIAAVYDDIIIYGTGETDEEAMACHDAAFKNLLDR 140
>SB_39524| Best HMM Match : rve (HMM E-Value=9.1e-17)
Length = 754
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -3
Query: 461 PGGIHTIPLPFERRLN-*IDELSTLRVVSLGPVVAGAGLSEDE-----VVRTEDLSERSR 300
P GI + P F+RR+N I+ L + V ++ G G +E+E V +DL +R R
Sbjct: 282 PFGIKSAPEEFQRRINECIEGLPNIAAVHDDIIIYGTGETEEEAMACHVAALKDLLDRCR 341
Query: 299 ANRV 288
+ +
Sbjct: 342 EHNL 345
>SB_7045| Best HMM Match : rve (HMM E-Value=3.8e-22)
Length = 1213
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -3
Query: 461 PGGIHTIPLPFERRLN-*IDELSTLRVVSLGPVVAGAGLSEDE-----VVRTEDLSERSR 300
P GI + P F+RR+N I+ L + V ++ G G +E+E V +DL +R R
Sbjct: 485 PFGIKSAPEEFQRRINECIEGLPNIAAVHDDIIIYGTGETEEEAMACHVAALKDLLDRCR 544
Query: 299 ANRV 288
+ +
Sbjct: 545 EHNL 548
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 149 EHGIDPTGAYHGDSDLQWSASMYTTMKPP 235
+HG+ TG + GDSD + A+++ K P
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSKKP 165
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 410 IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRANRVHGAGL 273
I +L V++L PV+ G +++D V + RSR R H G+
Sbjct: 222 IRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRHRCGI 267
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,608,384
Number of Sequences: 59808
Number of extensions: 449340
Number of successful extensions: 1322
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -