Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30991
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 42 2e-05
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 42 2e-05
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 42 2e-05
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 42 2e-05
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.57
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 25 2.3
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 7.0
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 23 7.0
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 23 7.0
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 23 7.0
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 9.3
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 41.9 bits (94), Expect = 2e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKE E+C+CLQGFQ + EEYPDRI + + ++P +
Sbjct: 13 LDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTYSVVP-SP 69
Query: 596 KLSD 607
K+SD
Sbjct: 70 KVSD 73
Score = 28.7 bits (61), Expect = 0.19
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +3
Query: 381 HYTEGAELVDSV*TSFERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTEL 560
HYTEGAELVD+V ++ + + T S + + + +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI 59
Query: 561 MNTFSSCYPSPKSCRTTISLNPY 629
MNT+ S PSPK T + PY
Sbjct: 60 MNTY-SVVPSPKVSDTVV--EPY 79
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 41.9 bits (94), Expect = 2e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKE E+C+CLQGFQ + EEYPDRI + + ++P +
Sbjct: 13 LDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTYSVVP-SP 69
Query: 596 KLSD 607
K+SD
Sbjct: 70 KVSD 73
Score = 28.7 bits (61), Expect = 0.19
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +3
Query: 381 HYTEGAELVDSV*TSFERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTEL 560
HYTEGAELVD+V ++ + + T S + + + +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI 59
Query: 561 MNTFSSCYPSPKSCRTTISLNPY 629
MNT+ S PSPK T + PY
Sbjct: 60 MNTY-SVVPSPKVSDTVV--EPY 79
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 41.9 bits (94), Expect = 2e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKE E+C+CLQGFQ + EEYPDRI + + ++P +
Sbjct: 13 LDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTYSVVP-SP 69
Query: 596 KLSD 607
K+SD
Sbjct: 70 KVSD 73
Score = 28.7 bits (61), Expect = 0.19
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +3
Query: 381 HYTEGAELVDSV*TSFERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTEL 560
HYTEGAELVD+V ++ + + T S + + + +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI 59
Query: 561 MNTFSSCYPSPKSCRTTISLNPY 629
MNT+ S PSPK T + PY
Sbjct: 60 MNTY-SVVPSPKVSDTVV--EPY 79
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 41.9 bits (94), Expect = 2e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKE E+C+CLQGFQ + EEYPDRI + + ++P +
Sbjct: 13 LDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTYSVVP-SP 69
Query: 596 KLSD 607
K+SD
Sbjct: 70 KVSD 73
Score = 28.7 bits (61), Expect = 0.19
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +3
Query: 381 HYTEGAELVDSV*TSFERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTEL 560
HYTEGAELVD+V ++ + + T S + + + +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRI 59
Query: 561 MNTFSSCYPSPKSCRTTISLNPY 629
MNT+ S PSPK T + PY
Sbjct: 60 MNTY-SVVPSPKVSDTVV--EPY 79
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 27.1 bits (57), Expect = 0.57
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWE 136
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 25.0 bits (52), Expect = 2.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 327 DGRSVRKVQSEQSPWCRAPSRRGWPGHVLAAGGFIVVYI 211
DGR V ++ W + S R PG FI +YI
Sbjct: 103 DGRIVARLPFVPISWIQGLSHRNLPGDDYTECSFIFLYI 141
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 385 TRRVLSSSIQFRRRSKGSGIV*MPPGIP 468
T R+L+S++ RR GS P G P
Sbjct: 60 TERILASTLPARRLQNGSSSPHAPNGTP 87
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 209 SMYTTMKPPAASTCPGHPRRLGARHH 286
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 209 SMYTTMKPPAASTCPGHPRRLGARHH 286
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 209 SMYTTMKPPAASTCPGHPRRLGARHH 286
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 315 VRKVQSEQSPWCRAPSRRGWPGHVLAAGGFIVVYID 208
VR QS++ P C PGH+ G+ ++Y+D
Sbjct: 806 VRHSQSDEVPVCE-------PGHLKLWDGYSLLYVD 834
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,567
Number of Sequences: 2352
Number of extensions: 15243
Number of successful extensions: 47
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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