Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30991
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 119 2e-27
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 119 2e-27
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 117 7e-27
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 117 7e-27
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 117 7e-27
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 65 4e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 65 4e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 65 4e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 65 4e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 63 2e-10
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 63 2e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 63 2e-10
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 63 2e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 63 2e-10
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 63 2e-10
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 54 7e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 47 1e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 47 1e-05
U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical p... 29 3.2
AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 29 3.2
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 119 bits (286), Expect = 2e-27
Identities = 66/125 (52%), Positives = 75/125 (60%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
A+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+V R
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV-LDVVR 121
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
K T S + + + +MNTF S PSPK T +
Sbjct: 122 KEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF-SVVPSPKVSDTVV 180
Query: 615 SLNPY 629
PY
Sbjct: 181 --EPY 183
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVHIQAGQCGNQIG+K WE+ISDEHGIDP+G Y GDSDLQ
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQ 43
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA KYV
Sbjct: 42 LQLERINVYYNEAGSNKYV 60
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 119 bits (286), Expect = 2e-27
Identities = 66/125 (52%), Positives = 75/125 (60%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
A+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+V R
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV-LDVVR 121
Query: 435 KRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCRTTI 614
K T S + + + +MNTF S PSPK T +
Sbjct: 122 KEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF-SVVPSPKVSDTVV 180
Query: 615 SLNPY 629
PY
Sbjct: 181 --EPY 183
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVHIQAGQCGNQIG+K WE+ISDEHGIDP+G Y GDSDLQ
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQ 43
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA KYV
Sbjct: 42 LQLERINVYYNEAGSNKYV 60
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 117 bits (282), Expect = 7e-27
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 81.0 bits (191), Expect = 8e-16
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVH+QAGQCGNQIG+K WE+ISDEHGI P G + G+SDLQ
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDV+RKEAE C+CLQGFQ + EE+PDRI F ++P +
Sbjct: 117 LDVIRKEAEGCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEFPDRIMSS-FSVVP-SP 173
Query: 596 KLSD 607
K+SD
Sbjct: 174 KVSD 177
Score = 34.3 bits (75), Expect = 0.086
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERI+VYYNEA+ GKYV
Sbjct: 42 LQLERIDVYYNEANNGKYV 60
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 117 bits (282), Expect = 7e-27
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVH+QAGQCGNQIGAK WE+ISDEHGI P G Y G+SDLQ
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQ 43
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/64 (43%), Positives = 34/64 (53%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKEAE C+CLQGFQ + EEYPDRI F ++P +
Sbjct: 117 LDVVRKEAEGCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRIMSS-FSVVP-SP 173
Query: 596 KLSD 607
K+SD
Sbjct: 174 KVSD 177
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEA+GGKYV
Sbjct: 42 LQLERINVYYNEANGGKYV 60
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 117 bits (282), Expect = 7e-27
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 79.8 bits (188), Expect = 2e-15
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVH+QAGQCGNQIG+K WE+ISDEHGI P G + G++DLQ
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQ 43
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDV+RKEAE C+CLQGFQ + EEYPDRI F ++P +
Sbjct: 117 LDVIRKEAEGCDCLQGFQ-LTHSLGGGTGSGMGTLLISKIREEYPDRIMSS-FSVVP-SP 173
Query: 596 KLSD 607
K+SD
Sbjct: 174 KVSD 177
Score = 34.3 bits (75), Expect = 0.086
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERI+VYYNEA+ GKYV
Sbjct: 42 LQLERIDVYYNEANNGKYV 60
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 114 bits (275), Expect = 5e-26
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREIVHIQAGQCGNQIGAK WE+ISDEHGIDPTGAY+GDSDLQ
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQ 43
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/64 (45%), Positives = 35/64 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRINEHIFKLLPIT* 595
LDVVRKEAESC+CLQGFQ + EEYPDRI F ++P +
Sbjct: 117 LDVVRKEAESCDCLQGFQ-MTHSLGGGTGSGMGTLLISKIREEYPDRI-MMTFSVVP-SP 173
Query: 596 KLSD 607
K+SD
Sbjct: 174 KVSD 177
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEASGGKYV
Sbjct: 42 LQLERINVYYNEASGGKYV 60
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/61 (52%), Positives = 48/61 (78%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
AILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V + R
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 435 K 437
+
Sbjct: 123 E 123
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGD--SDLQWSASMYTTMK 229
M+EI+++Q GQCGNQIGAK WE IS+EHG+ G Y GD S L+ S Y M+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME 55
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/61 (52%), Positives = 48/61 (78%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
AILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V + R
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 435 K 437
+
Sbjct: 123 E 123
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGD--SDLQWSASMYTTMK 229
M+EI+++Q GQCGNQIGAK WE IS+EHG+ G Y GD S L+ S Y M+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME 55
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
AI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D V
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGF 466
LD +RK+ E+CE LQGF
Sbjct: 122 LDRIRKQTENCEGLQGF 138
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
AI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVV 118
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/51 (45%), Positives = 25/51 (49%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MREIV I GQ G QIG WE+ EHGI P G D+ Y T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNT 51
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G SD Q +TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSDQQADGESFTT 49
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G SD Q +TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSDQQADGESFTT 49
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D T+ +R
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIID---TTLDR 118
Query: 435 KRNRVN 452
R N
Sbjct: 119 IRRLAN 124
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 413
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDT 115
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G S+ Q +TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSEQQNEGGSFTT 49
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 63.3 bits (147), Expect = 2e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G D L S ++T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 63.3 bits (147), Expect = 2e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 115
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
RE++ I GQ G QIG WE+ EHGI P G D L S ++T
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 50
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 413
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDT 115
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G S+ Q +TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSEQQNEGGSFTT 49
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 63.3 bits (147), Expect = 2e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G D L S ++T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 63.3 bits (147), Expect = 2e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE++ I GQ G QIG WE+ EHGI P G D L S ++T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
AI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 65 NKMREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDL 196
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSL 47
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 258 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFERK 437
+ VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V +R
Sbjct: 72 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131
Query: 438 RNRVN 452
N
Sbjct: 132 AENCN 136
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSD 193
RE++ I GQ G QIG WE+ EHGI P G YH + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDD 46
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 258 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFERK 437
+ VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V +R
Sbjct: 44 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 103
Query: 438 RNRVN 452
N
Sbjct: 104 AENCN 108
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV*TS 425
A+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 426 FERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCR 605
R+ N + D T S S + + ++ +++ T+S S S
Sbjct: 124 IIREAENTN-NLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTS-- 180
Query: 606 TTISLNPY 629
T + ++PY
Sbjct: 181 TDVVVHPY 188
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDL 196
++ + GQCGNQ+ W+ + DEHGI+ G + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV*TS 425
A+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 426 FERKRNRVNASRDSN*HTRSXXXXXXXXXXSFIFKIHLKSTLTELMNTFSSCYPSPKSCR 605
R+ N + D T S S + + ++ +++ T+S S S
Sbjct: 124 IIREAENTN-NLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTS-- 180
Query: 606 TTISLNPY 629
T + ++PY
Sbjct: 181 TDVVVHPY 188
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDL 196
++ + GQCGNQ+ W+ + DEHGI+ G + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical
protein R05F9.11 protein.
Length = 521
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 248 CPGHPRRLGARHHGLCSLWTF 310
CPG PR L R GL SL+TF
Sbjct: 80 CPGMPRSLKERLFGLYSLYTF 100
>AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical
protein Y39E4B.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 248 CPGHPRRLGARHHGLCSLWTF 310
CPG PR L R GL SL+TF
Sbjct: 80 CPGTPRSLKERLFGLYSLYTF 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,864,203
Number of Sequences: 27780
Number of extensions: 335006
Number of successful extensions: 916
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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