Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30991
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 116 1e-26
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 116 1e-26
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 116 1e-26
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 116 1e-26
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 116 2e-26
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 115 4e-26
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 114 5e-26
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 113 1e-25
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 113 1e-25
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 65 4e-11
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 65 4e-11
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 65 5e-11
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 65 5e-11
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 65 5e-11
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 65 5e-11
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 65 5e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 44 7e-05
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 44 7e-05
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.74
At1g28960.4 68414.m03539 MutT/nudix family protein similar to co... 29 3.0
At1g28960.3 68414.m03541 MutT/nudix family protein similar to co... 29 3.0
At1g28960.2 68414.m03538 MutT/nudix family protein similar to co... 29 3.0
At1g28960.1 68414.m03540 MutT/nudix family protein similar to co... 29 3.0
At3g13050.1 68416.m01626 transporter-related low similarity to a... 28 6.9
At1g33780.1 68414.m04175 expressed protein similar to At3g29240 ... 28 6.9
At5g65600.1 68418.m08253 legume lectin family protein / protein ... 27 9.1
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 27 9.1
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 116 bits (280), Expect = 1e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIGAK WE+I DEHGID TG Y GDS LQ
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQ 43
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+ +CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENSDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERI+VY+NEASGGKYV
Sbjct: 42 LQLERIDVYFNEASGGKYV 60
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 116 bits (280), Expect = 1e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIGAK WE++ EHGID TG Y G++DLQ
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ER+NVYYNEAS G++V
Sbjct: 42 LQLERVNVYYNEASCGRFV 60
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 116 bits (280), Expect = 1e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIGAK WE+I EHGID TG GD+DLQ
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVY+NEASGGKYV
Sbjct: 42 LQLERINVYFNEASGGKYV 60
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 116 bits (280), Expect = 1e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIG+K WE+++ EHGID TG Y GDS+LQ
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 34.7 bits (76), Expect = 0.060
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ER+NVYYNEAS G+YV
Sbjct: 42 LQLERVNVYYNEASCGRYV 60
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 116 bits (279), Expect = 2e-26
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGD-SDLQ 199
MREI+HIQ GQCGNQIG+K WE+I DEHGID TG Y GD +DLQ
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQ 44
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 118 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 164
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEASGG+YV
Sbjct: 43 LQLERINVYYNEASGGRYV 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 115 bits (276), Expect = 4e-26
Identities = 48/54 (88%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDS-DLQ 199
MREI+H+Q GQCGNQIG+K WE+I DEHG+DPTG Y+GDS DLQ
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQ 44
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 118 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 164
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEASGG+YV
Sbjct: 43 LQLERINVYYNEASGGRYV 61
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 114 bits (275), Expect = 5e-26
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
AIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Score = 81.0 bits (191), Expect = 7e-16
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIG+K WE++ DEHGIDPTG Y G+SDLQ
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 34.7 bits (76), Expect = 0.060
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ER+NVYYNEAS G+YV
Sbjct: 42 LQLERVNVYYNEASCGRYV 60
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (272), Expect = 1e-25
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 81.4 bits (192), Expect = 5e-16
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIGAK WE++ EHGIDPTG Y GDSDLQ
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEAS G++V
Sbjct: 42 LQLERINVYYNEASCGRFV 60
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (272), Expect = 1e-25
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
A+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Score = 81.4 bits (192), Expect = 5e-16
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQ 199
MREI+HIQ GQCGNQIGAK WE++ EHGIDPTG Y GDSDLQ
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ 43
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2
Query: 416 LDVVRKEAESCECLQGFQXXXXXXXXXXXXXXXXXXLQNSFEEYPDRI 559
LDVVRKEAE+C+CLQGFQ + EEYPDR+
Sbjct: 117 LDVVRKEAENCDCLQGFQ-VCHSLGGGTGSGMGTLLISKIREEYPDRM 163
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 LAVERINVYYNEASGGKYV 249
L +ERINVYYNEAS G++V
Sbjct: 42 LQLERINVYYNEASCGRFV 60
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVD 116
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + T
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNT 51
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVD 116
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + T
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNT 51
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVD 116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNT 51
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVD 116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNT 51
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV*TSFER 434
A+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD T ER
Sbjct: 65 AVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVD---TCLER 121
Query: 435 KR 440
R
Sbjct: 122 LR 123
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDS 190
MREI+ I GQ G Q+G WE+ EHGI P G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVD 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNT 51
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 410
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVD 116
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKSWEIISDEHGIDPTGAYHGDSDLQWSASMYTT 223
MRE + I GQ G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNT 51
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
REI+ +Q GQCGNQIG + W+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKG-HYTEGAE 401
A+L+DLEP ++ +++G + ++ +N GAGNNWA G H +G E
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVE 115
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKSWEIISDEHGIDPTG 172
REI+ +Q GQCGNQIG + W+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 255 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKG-HYTEGAE 401
A+L+DLEP ++ +++G + ++ +N GAGNNWA G H +G E
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVE 115
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 413 SLDVVRKEAESCECLQGF 466
S+ VVRKEAE+C CLQ F
Sbjct: 4 SVGVVRKEAENCNCLQVF 21
>At1g28960.4 68414.m03539 MutT/nudix family protein similar to
coenzyme A diphosphatase [Mus musculus] GI:12746410;
contains Pfam profile PF00293: NUDIX domain
Length = 285
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 557 INEHIFKLLPIT*KLSDHN*FEPLQRP----TIFPVPIQLV*KTPGRKT 691
+++H+ +++P+ L D N F P+ P +F P+++ K R++
Sbjct: 177 LSKHLLRVIPVIGILRDKNKFNPIPNPGEVEAVFDAPLEMFLKDENRRS 225
>At1g28960.3 68414.m03541 MutT/nudix family protein similar to
coenzyme A diphosphatase [Mus musculus] GI:12746410;
contains Pfam profile PF00293: NUDIX domain
Length = 293
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 557 INEHIFKLLPIT*KLSDHN*FEPLQRP----TIFPVPIQLV*KTPGRKT 691
+++H+ +++P+ L D N F P+ P +F P+++ K R++
Sbjct: 177 LSKHLLRVIPVIGILRDKNKFNPIPNPGEVEAVFDAPLEMFLKDENRRS 225
>At1g28960.2 68414.m03538 MutT/nudix family protein similar to
coenzyme A diphosphatase [Mus musculus] GI:12746410;
contains Pfam profile PF00293: NUDIX domain
Length = 285
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 557 INEHIFKLLPIT*KLSDHN*FEPLQRP----TIFPVPIQLV*KTPGRKT 691
+++H+ +++P+ L D N F P+ P +F P+++ K R++
Sbjct: 177 LSKHLLRVIPVIGILRDKNKFNPIPNPGEVEAVFDAPLEMFLKDENRRS 225
>At1g28960.1 68414.m03540 MutT/nudix family protein similar to
coenzyme A diphosphatase [Mus musculus] GI:12746410;
contains Pfam profile PF00293: NUDIX domain
Length = 293
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 557 INEHIFKLLPIT*KLSDHN*FEPLQRP----TIFPVPIQLV*KTPGRKT 691
+++H+ +++P+ L D N F P+ P +F P+++ K R++
Sbjct: 177 LSKHLLRVIPVIGILRDKNKFNPIPNPGEVEAVFDAPLEMFLKDENRRS 225
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 107 GNQIGAKSWEIISDEHG 157
G IGA SW I+SD+HG
Sbjct: 72 GMLIGAYSWGIVSDKHG 88
>At1g33780.1 68414.m04175 expressed protein similar to At3g29240
[Arabidopsis thaliana]; contains Pfam profile PF02622:
Uncharacterized ACR, COG1678
Length = 325
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 534 HLKSTLTELMNTFSSC 581
H+KST TEL TFS C
Sbjct: 188 HMKSTKTELATTFSEC 203
>At5g65600.1 68418.m08253 legume lectin family protein / protein
kinase family protein contains Pfam domains PF00138:
Legume lectins alpha domain, PF00139: Legume lectins
beta domain and PF00069: Protein kinase domain
Length = 675
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -1
Query: 700 KKLGFPSGCFSN*LDGNWKNCGPL*GFKLIVVRQLLGDG*QLENVFINSVRVLFK 536
+KLG G F +GN K + + V++L GD Q +N F+N V+++ K
Sbjct: 354 RKLG--EGGFGAVYEGNLKEINTM-----VAVKKLSGDSRQGKNEFLNEVKIISK 401
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -3
Query: 377 LGPVVAGAGLSEDEVVRTEDLSERSRANRVHGAGLQVDEDGRG 249
LG V+ G+ EDE++ D+ +A+ V + +G G
Sbjct: 1341 LGTVMQNPGIPEDEIINLMDILNPQKASGVDDTRRLYESEGNG 1383
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,032
Number of Sequences: 28952
Number of extensions: 315343
Number of successful extensions: 870
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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