Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30988
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.1  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -3

Query: 755 FLVLSAQFPVLAHPLPVLIFL-WSLAKFNL-LWVEY 654
           +L+L+A F    + LP+LIF    + K  L  W+E+
Sbjct: 141 YLILAAWFFSALYSLPILIFYEEKIVKGKLQCWIEF 176


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 530 YHIFCKRLRAQYL*SYGTSSLIVL 459
           Y+  CK L+A Y+ +   +SLI L
Sbjct: 169 YYAICKPLKAGYICTKTRASLICL 192


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 530 YHIFCKRLRAQYL*SYGTSSLIVL 459
           Y+  CK L+A Y+ +   +SLI L
Sbjct: 169 YYAICKPLKAGYICTKTRASLICL 192


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 636 MSKCLCIFNPQKVKLRQRPKKN*HR 710
           +SKC+ +FNP +  L ++  +  HR
Sbjct: 227 ISKCIYVFNP-RYYLEKKVTRRLHR 250


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 114 HNQRRLYFWHCV 79
           +N RR+Y+++CV
Sbjct: 51  YNLRRIYYFYCV 62


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 636 MSKCLCIFNPQKVKLRQRPKKN*HR 710
           +SKC+ +FNP +  L ++  +  HR
Sbjct: 227 ISKCIYVFNP-RYYLEKKVTRRLHR 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,244
Number of Sequences: 336
Number of extensions: 4207
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)