Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30987
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 410 RQTFIPIMNRFCFLFISVFTIYP 342
           R  F P   RFC   +S+FT  P
Sbjct: 309 RSKFRPSSLRFCLNILSIFTYVP 331


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 410 RQTFIPIMNRFCFLFISVFTIYP 342
           R  F P   RFC   +S+FT  P
Sbjct: 34  RSKFRPSSLRFCLNILSIFTYVP 56


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 348 YSKHRYKEETKSVHDRYKCL-PD 413
           YSK+ Y E+   + D YK L PD
Sbjct: 346 YSKNTYNEQGNKLADLYKSLGPD 368


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 348 YSKHRYKEETKSVHDRYKCL-PD 413
           YSK+ Y E+   + D YK L PD
Sbjct: 238 YSKNTYNEQGNKLADLYKSLGPD 260


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 432 PSKLFPYQANIYTYHEQILFPLYICVYY 349
           P  +F     + TY+    F + +CVYY
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLCVYY 115


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 287 FIYLIMVVMIVAVNNKKSSLILN*CKPTLTNF 192
           FI ++  + +VA+N  KSS   N  K T  ++
Sbjct: 294 FISIVTALFLVAINFNKSSSEENEGKTTQLDY 325


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 530 FSIILRAFCLSMYSYTIF 477
           FS + R  CL  YSY  +
Sbjct: 73  FSFMSRFLCLPFYSYFFY 90


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 287 FIYLIMVVMIVAVNNKKSSLILN*CKPTLTNF 192
           FI ++  + +VA+N  KSS   N  K T  ++
Sbjct: 294 FISIVTALFLVAINFNKSSSEENEGKTTQLDY 325


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 530 FSIILRAFCLSMYSYTIF 477
           FS + R  CL  YSY  +
Sbjct: 29  FSFMSRFLCLPFYSYFFY 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,946
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)