BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30987
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50360-1|AAB16865.1| 142|Homo sapiens CaMK-II, gamma protein. 31 4.0
BC034044-1|AAH34044.1| 527|Homo sapiens calcium/calmodulin-depe... 31 4.0
BC021269-1|AAH21269.2| 453|Homo sapiens CAMK2G protein protein. 31 4.0
AL713896-5|CAI13790.1| 529|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL713896-4|CAI13789.1| 495|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL713896-3|CAI13791.1| 527|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL713896-2|CAI13788.1| 516|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL713896-1|CAI13787.1| 453|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL596247-5|CAI13965.1| 529|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL596247-4|CAI13966.1| 495|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL596247-3|CAI13968.1| 527|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL596247-2|CAI13967.1| 516|Homo sapiens calcium/calmodulin-depe... 31 4.0
AL596247-1|CAI13964.1| 453|Homo sapiens calcium/calmodulin-depe... 31 4.0
AB209474-1|BAD92711.1| 155|Homo sapiens calcium/calmodulin-depe... 31 4.0
U50358-1|AAB16863.1| 141|Homo sapiens CaMK-II, beta protein. 30 9.2
U23460-1|AAC99802.1| 664|Homo sapiens proline rich calmodulin-d... 30 9.2
BC019070-1|AAH19070.1| 503|Homo sapiens calcium/calmodulin-depe... 30 9.2
AK222703-1|BAD96423.1| 542|Homo sapiens calcium/calmodulin-depe... 30 9.2
AJ252238-1|CAB65122.1| 518|Homo sapiens calcium/calmodulin depe... 30 9.2
AJ252237-1|CAB65121.1| 479|Homo sapiens calcium/calmodulin depe... 30 9.2
AJ252236-1|CAB65120.1| 503|Homo sapiens calcium/calmodulin depe... 30 9.2
AF140350-1|AAD42070.1| 449|Homo sapiens calcium/calmodulin-depe... 30 9.2
AF112472-1|AAD03744.1| 542|Homo sapiens calcium/calmodulin-depe... 30 9.2
AF112471-1|AAD03743.1| 517|Homo sapiens calcium/calmodulin-depe... 30 9.2
AF083419-1|AAD42038.1| 517|Homo sapiens calcium/calmodulin-depe... 30 9.2
AF081572-1|AAD42036.1| 503|Homo sapiens calcium/calmodulin-depe... 30 9.2
AF078803-1|AAD42035.1| 542|Homo sapiens calcium/calmodulin-depe... 30 9.2
>U50360-1|AAB16865.1| 142|Homo sapiens CaMK-II, gamma protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 54 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 113
Query: 167 V 165
V
Sbjct: 114 V 114
>BC034044-1|AAH34044.1| 527|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 527
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 378 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 437
Query: 167 V 165
V
Sbjct: 438 V 438
>BC021269-1|AAH21269.2| 453|Homo sapiens CAMK2G protein protein.
Length = 453
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 304 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 363
Query: 167 V 165
V
Sbjct: 364 V 364
>AL713896-5|CAI13790.1| 529|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 529
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 380 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 439
Query: 167 V 165
V
Sbjct: 440 V 440
>AL713896-4|CAI13789.1| 495|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 495
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 346 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 405
Query: 167 V 165
V
Sbjct: 406 V 406
>AL713896-3|CAI13791.1| 527|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 527
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 378 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 437
Query: 167 V 165
V
Sbjct: 438 V 438
>AL713896-2|CAI13788.1| 516|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 516
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 367 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 426
Query: 167 V 165
V
Sbjct: 427 V 427
>AL713896-1|CAI13787.1| 453|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 453
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 304 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 363
Query: 167 V 165
V
Sbjct: 364 V 364
>AL596247-5|CAI13965.1| 529|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 529
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 380 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 439
Query: 167 V 165
V
Sbjct: 440 V 440
>AL596247-4|CAI13966.1| 495|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 495
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 346 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 405
Query: 167 V 165
V
Sbjct: 406 V 406
>AL596247-3|CAI13968.1| 527|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 527
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 378 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 437
Query: 167 V 165
V
Sbjct: 438 V 438
>AL596247-2|CAI13967.1| 516|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 516
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 367 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 426
Query: 167 V 165
V
Sbjct: 427 V 427
>AL596247-1|CAI13964.1| 453|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II gamma protein.
Length = 453
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 304 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 363
Query: 167 V 165
V
Sbjct: 364 V 364
>AB209474-1|BAD92711.1| 155|Homo sapiens
calcium/calmodulin-dependent protein kinase II gamma
isoform 6 variant protein.
Length = 155
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 GSDSTVNSDSTEFDLP*LFIYLIMVV--MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNL 168
GS + N+ + + DL +I + +I A+NN C P LT+FE + GNL
Sbjct: 67 GSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNL 126
Query: 167 V 165
V
Sbjct: 127 V 127
>U50358-1|AAB16863.1| 141|Homo sapiens CaMK-II, beta protein.
Length = 141
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 81 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 113
>U23460-1|AAC99802.1| 664|Homo sapiens proline rich
calmodulin-dependent protein kinase protein.
Length = 664
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 543 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 575
>BC019070-1|AAH19070.1| 503|Homo sapiens
calcium/calmodulin-dependent protein kinase (CaM kinase)
II beta protein.
Length = 503
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 382 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 414
>AK222703-1|BAD96423.1| 542|Homo sapiens
calcium/calmodulin-dependent protein kinase IIB isoform
2 variant protein.
Length = 542
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 421 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 453
>AJ252238-1|CAB65122.1| 518|Homo sapiens calcium/calmodulin
dependent protein kinase II beta 4 protein.
Length = 518
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 397 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 429
>AJ252237-1|CAB65121.1| 479|Homo sapiens calcium/calmodulin
dependent protein kinase II beta 2 protein.
Length = 479
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 358 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 390
>AJ252236-1|CAB65120.1| 503|Homo sapiens calcium/calmodulin
dependent protein kinase II beta 1 protein.
Length = 503
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 382 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 414
>AF140350-1|AAD42070.1| 449|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta 7
subunit protein.
Length = 449
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 328 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 360
>AF112472-1|AAD03744.1| 542|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta
subunit protein.
Length = 542
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 421 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 453
>AF112471-1|AAD03743.1| 517|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta
subunit protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 396 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 428
>AF083419-1|AAD42038.1| 517|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta e
subunit protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 396 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 428
>AF081572-1|AAD42036.1| 503|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta e'
subunit protein.
Length = 503
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 382 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 414
>AF078803-1|AAD42035.1| 542|Homo sapiens
calcium/calmodulin-dependent protein kinase II beta
subunit protein.
Length = 542
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 263 MIVAVNNKKSSLILN*CKPTLTNFEVKCCGNLV 165
+I AVNN C P LT+FE + GNLV
Sbjct: 421 LIEAVNNGDFEAYAKICDPGLTSFEPEALGNLV 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,343,531
Number of Sequences: 237096
Number of extensions: 1529932
Number of successful extensions: 2115
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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