Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30986
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    26   0.96 
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    24   5.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.0  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 282 TPNFP-PLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLSRKVYILK 419
           T N P P + A TT+   PK  +   G V + C L + L  K ++ K
Sbjct: 315 TQNKPRPGIVAPTTIPTVPKKSLAEVGKVYDRCELANDLLHKFHLPK 361


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 213 EHCYFWYALSGRYQHSA*QIVVTIA 139
           +H    +AL   YQHSA  IV TIA
Sbjct: 44  QHVGSVHALPAIYQHSAPAIVKTIA 68


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 342  LIHPPGSVPN 371
            L+HPPG+ PN
Sbjct: 1204 LLHPPGTAPN 1213


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 405 VYILKVAPTITPELIRGVCEGMEGVVLE 488
           +Y+LK    ITP  I     G  G+V+E
Sbjct: 235 IYLLKSYDDITPNQIHTGMNGELGIVME 262


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +3

Query: 303 LEAKTTL---EVDPKMLIHPPGSVPNE 374
           L+A T L   E DP + I PP ++P++
Sbjct: 435 LDAVTVLPPGEWDPSIRIEPPAAIPSQ 461


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 294 PPLLEAKTTLEVDPKMLIHPPGSVPNECRL 383
           PP+L +    +   + L+H P S P+   L
Sbjct: 77  PPVLSSSAQQQQQQQQLLHHPSSSPHSNHL 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,204
Number of Sequences: 2352
Number of extensions: 16901
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)