Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30986
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.    94   4e-19
BC024187-1|AAH24187.1|  779|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   8.8  
AF461690-1|AAN77932.1|  779|Homo sapiens DEAD-box containing hel...    30   8.8  
AF260270-1|AAF70326.1|  714|Homo sapiens PAD protein.                  30   8.8  

>BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.
          Length = 439

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 47/75 (62%), Positives = 56/75 (74%)
 Frame = +1

Query: 13  GFVVLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQR 192
           GFVV+HGTDT A+  S+LSFMLE + KTV+LTGAQVPI    SDG  NLL A+L+A    
Sbjct: 109 GFVVIHGTDTMAFAASMLSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYV 168

Query: 193 IPEVTVFFGAKLFRG 237
           IPEV +FF  +LFRG
Sbjct: 169 IPEVCLFFQNQLFRG 183



 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +3

Query: 234 GN*SKKSSNTRIYAFDTPNFPPLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLSRKVYI 413
           GN + K    R  AF +PN  PL      + ++ +++    G       +H  + + V +
Sbjct: 183 GNRATKVDARRFAAFCSPNLLPLATVGADITINRELVRKVDGKAG--LVVHSSMEQDVGL 240

Query: 414 LKVAPTITPELIRGVCEG-MEGVVLETYGNGN 506
           L++ P I   L+R   +  ++GVV+ET+G+GN
Sbjct: 241 LRLYPGIPAALVRAFLQPPLKGVVMETFGSGN 272


>BC024187-1|AAH24187.1|  779|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 40 protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +1

Query: 22  VLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPE 201
           +L   + T +   +L    E    T +L G    +FQ +S      L  V+++AT  + +
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217

Query: 202 VTVFFG 219
           ++ FFG
Sbjct: 218 LSAFFG 223


>AF461690-1|AAN77932.1|  779|Homo sapiens DEAD-box containing
           helicase-like protein protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +1

Query: 22  VLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPE 201
           +L   + T +   +L    E    T +L G    +FQ +S      L  V+++AT  + +
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217

Query: 202 VTVFFG 219
           ++ FFG
Sbjct: 218 LSAFFG 223


>AF260270-1|AAF70326.1|  714|Homo sapiens PAD protein.
          Length = 714

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +1

Query: 22  VLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPE 201
           +L   + T +   +L    E    T +L G    +FQ +S      L  V+++AT  + +
Sbjct: 59  ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 118

Query: 202 VTVFFG 219
           ++ FFG
Sbjct: 119 LSAFFG 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,964,780
Number of Sequences: 237096
Number of extensions: 2344461
Number of successful extensions: 5150
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5144
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)