Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30986
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical p...    94   1e-19
Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical p...    94   1e-19
Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical pr...    94   1e-19
Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical pr...    94   1e-19
AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical ...    30   1.3  
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p...    29   3.1  
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p...    29   3.1  
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p...    29   3.1  
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.        29   3.1  
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ...    29   3.1  
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ...    28   5.4  

>Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical
           protein C27A7.5e protein.
          Length = 684

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +1

Query: 13  GFVVLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQR 192
           GFVVLHGTDT AY  S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    
Sbjct: 195 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFD 254

Query: 193 IPEVTVFFGAKLFRG 237
           IPEV V+F  KL RG
Sbjct: 255 IPEVCVYFNNKLMRG 269



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +3

Query: 219 SKTL*GN*SKKSSNTRIYAFDTPNFPPLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLS 398
           +K + GN + K  N+ + AFD+PN  PL +    ++V+   +      +     +H+ L 
Sbjct: 264 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVNYDSIFR--SDMVAAFTVHENLC 321

Query: 399 RKVYILKVAPTITPELIRGVCE-GMEGVVLETYGNGNIQSSAKRSTRRSKEXXXXXXXXX 575
           R V +L++ P++T E +R   +    G +L+T+G+GN+ +  +      KE         
Sbjct: 322 RDVGMLRIFPSMTIESVRAFLQPPTRGCILQTFGSGNMPTRRQDIIMALKEAIARGVMVV 381

Query: 576 XXXQCING 599
              QC+ G
Sbjct: 382 NCSQCLKG 389


>Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical
           protein C27A7.5d protein.
          Length = 647

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +1

Query: 13  GFVVLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQR 192
           GFVVLHGTDT AY  S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    
Sbjct: 158 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFD 217

Query: 193 IPEVTVFFGAKLFRG 237
           IPEV V+F  KL RG
Sbjct: 218 IPEVCVYFNNKLMRG 232



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +3

Query: 219 SKTL*GN*SKKSSNTRIYAFDTPNFPPLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLS 398
           +K + GN + K  N+ + AFD+PN  PL +    ++V+   +      +     +H+ L 
Sbjct: 227 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVNYDSIFR--SDMVAAFTVHENLC 284

Query: 399 RKVYILKVAPTITPELIRGVCE-GMEGVVLETYGNGNIQSSAKRSTRRSKEXXXXXXXXX 575
           R V +L++ P++T E +R   +    G +L+T+G+GN+ +  +      KE         
Sbjct: 285 RDVGMLRIFPSMTIESVRAFLQPPTRGCILQTFGSGNMPTRRQDIIMALKEAIARGVMVV 344

Query: 576 XXXQCING 599
              QC+ G
Sbjct: 345 NCSQCLKG 352


>Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical
           protein C27A7.5c protein.
          Length = 715

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +1

Query: 13  GFVVLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQR 192
           GFVVLHGTDT AY  S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    
Sbjct: 226 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFD 285

Query: 193 IPEVTVFFGAKLFRG 237
           IPEV V+F  KL RG
Sbjct: 286 IPEVCVYFNNKLMRG 300



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +3

Query: 219 SKTL*GN*SKKSSNTRIYAFDTPNFPPLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLS 398
           +K + GN + K  N+ + AFD+PN  PL +    ++V+   +      +     +H+ L 
Sbjct: 295 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVNYDSIFR--SDMVAAFTVHENLC 352

Query: 399 RKVYILKVAPTITPELIRGVCE-GMEGVVLETYGNGNIQSSAKRSTRRSKEXXXXXXXXX 575
           R V +L++ P++T E +R   +    G +L+T+G+GN+ +  +      KE         
Sbjct: 353 RDVGMLRIFPSMTIESVRAFLQPPTRGCILQTFGSGNMPTRRQDIIMALKEAIARGVMVV 412

Query: 576 XXXQCING 599
              QC+ G
Sbjct: 413 NCSQCLKG 420


>Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical
           protein C27A7.5a protein.
          Length = 713

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +1

Query: 13  GFVVLHGTDTTAYGGSVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQR 192
           GFVVLHGTDT AY  S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    
Sbjct: 224 GFVVLHGTDTLAYTASALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFD 283

Query: 193 IPEVTVFFGAKLFRG 237
           IPEV V+F  KL RG
Sbjct: 284 IPEVCVYFNNKLMRG 298



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +3

Query: 219 SKTL*GN*SKKSSNTRIYAFDTPNFPPLLEAKTTLEVDPKMLIHPPGSVPNECRLHDQLS 398
           +K + GN + K  N+ + AFD+PN  PL +    ++V+   +      +     +H+ L 
Sbjct: 293 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVNYDSIFR--SDMVAAFTVHENLC 350

Query: 399 RKVYILKVAPTITPELIRGVCE-GMEGVVLETYGNGNIQSSAKRSTRRSKEXXXXXXXXX 575
           R V +L++ P++T E +R   +    G +L+T+G+GN+ +  +      KE         
Sbjct: 351 RDVGMLRIFPSMTIESVRAFLQPPTRGCILQTFGSGNMPTRRQDIIMALKEAIARGVMVV 410

Query: 576 XXXQCING 599
              QC+ G
Sbjct: 411 NCSQCLKG 418


>AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical
           protein C50H11.13 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 77  WKPSERLLYSLVLRFQYFNLEAMVTTICYALC 172
           W  S RLL+  V+      L  ++ T CY LC
Sbjct: 26  WTNSSRLLFYSVISISLLTLPILLLTFCYILC 57


>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
           protein 2, isoform a protein.
          Length = 1538

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CINIFGSTSKVVFASNNGGKFGVS 278
           C+ I GS ++V++A   GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481


>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
           protein 2, isoform c protein.
          Length = 1926

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CINIFGSTSKVVFASNNGGKFGVS 278
           C+ I GS ++V++A   GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481


>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
           protein 2, isoform b protein.
          Length = 2027

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CINIFGSTSKVVFASNNGGKFGVS 278
           C+ I GS ++V++A   GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615


>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
          Length = 1053

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CINIFGSTSKVVFASNNGGKFGVS 278
           C+ I GS ++V++A   GG FG+S
Sbjct: 79  CVVIVGSAAEVIWAEVYGGSFGIS 102


>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
           activated calciumchannel alpha-1 subunit protein.
          Length = 2027

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CINIFGSTSKVVFASNNGGKFGVS 278
           C+ I GS ++V++A   GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615


>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
            protein F07G11.9 protein.
          Length = 2025

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 270  KYACSNFFYSSSPKEFCSKEHC 205
            KY CSN  Y    KEFCS   C
Sbjct: 1992 KYCCSNGGYCGIGKEFCSCNGC 2013


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,341,043
Number of Sequences: 27780
Number of extensions: 374527
Number of successful extensions: 1003
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)