Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30986
(683 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 25 0.89
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 3.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 6.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.3
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 24.6 bits (51), Expect = 0.89
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 464 FTNSTDQLRCNCRRHL 417
F T ++CNC+RH+
Sbjct: 21 FVTPTMSIKCNCKRHV 36
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 72 HVGNRRKDCCTHWCS 116
H+ R+K+CC W S
Sbjct: 392 HMQPRKKNCCRSWLS 406
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 72 HVGNRRKDCCTHWCS 116
H+ R+K+CC W S
Sbjct: 392 HMQPRKKNCCRSWLS 406
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 637 KSSFRKWPSKGRLPLMH*VYVYNQHVVLNSSFDLLVDLFA 518
K FR+W S P Y Q V + S D L +L A
Sbjct: 450 KEKFRRWVSTMSRPFEVRYDPYTQRVEILDSVDRLDNLMA 489
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 237
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 237
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 237
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 237
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 226
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSRERSC 237
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 226
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 226
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 129 KYWNLSTSEYNSLSDGFQHERQDRTTVRSC 40
K + S++ S + GFQH + RSC
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 94 TVVLTGAQVPIFQPRS 141
TV+ TGA V ++QP S
Sbjct: 746 TVIQTGANVNLWQPLS 761
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 550 SSFDLLVDLFALDWMFPFPYVSRTTP 473
S+F + +D F W+ V+RT P
Sbjct: 124 SAFKIAIDKFDRLWVLDSGLVNRTVP 149
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 502 GTSNQAQRDLQGDRKSC*EQRVGCKRKLNALTVTVLWKAIYENWTFT 642
GT +++ ++ K EQ R+LN+ + W+++ + T T
Sbjct: 56 GTEPRSKEEILLHAKDFLEQYFSSIRRLNSEAHRIRWESVQKEVTVT 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,389
Number of Sequences: 438
Number of extensions: 4862
Number of successful extensions: 38
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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