Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30982
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 645 KCWFSVPQWQW 677
           +CW  +  WQW
Sbjct: 193 QCWIDLQTWQW 203


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 595 CIYELLKNTFLIRKP*FKNFSVFLSMSDI 509
           CI+ELL +  L+  P F  FS  + ++ +
Sbjct: 358 CIHELLGHMPLLADPSFAQFSQEIGLASL 386


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 121 GFIHKLCRHIL*CVLFR 71
           G+IH L RH + C L R
Sbjct: 364 GWIHHLARHAVACFLTR 380


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 114 YISCVVIFYSAFFFEYKIKAFITHVLF 34
           ++ C+  FYSAF        F  H+LF
Sbjct: 208 FLPCIYYFYSAFII------FTIHLLF 228


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 11   SVFKIFVSNNT*VINAFILYSKKNAL 88
            SVF  F+ N   V+  F+L  KK+ L
Sbjct: 1268 SVFAFFMMNALFVLIVFLLTLKKDYL 1293


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 11   SVFKIFVSNNT*VINAFILYSKKNAL 88
            SVF  F+ N   V+  F+L  KK+ L
Sbjct: 1268 SVFAFFMMNALFVLIVFLLTLKKDYL 1293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,696
Number of Sequences: 336
Number of extensions: 2838
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)