Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30982
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate cotr...    30   7.1  
AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter...    30   7.1  
AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate cotr...    30   7.1  
AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate cotr...    30   7.1  

>AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate
           cotransporter 2b protein.
          Length = 1090

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 105 CVVIFYSAFFFEYKIKAFITHVLFETKILKT 13
           CV++F++ FF    +K F T   F TK+  T
Sbjct: 704 CVILFFTTFFLSSFLKQFKTKRYFPTKVRST 734


>AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter
           protein.
          Length = 1000

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 105 CVVIFYSAFFFEYKIKAFITHVLFETKILKT 13
           CV++F++ FF    +K F T   F TK+  T
Sbjct: 614 CVILFFTTFFLSSFLKQFKTKRYFPTKVRST 644


>AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate
           cotransporter 3 protein.
          Length = 1214

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 105 CVVIFYSAFFFEYKIKAFITHVLFETKILKT 13
           CV++F++ FF    +K F T   F TK+  T
Sbjct: 828 CVILFFTTFFLSSFLKQFKTKRYFPTKVRST 858


>AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate
           cotransporter2 protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 105 CVVIFYSAFFFEYKIKAFITHVLFETKILKT 13
           CV++F++ FF    +K F T   F TK+  T
Sbjct: 614 CVILFFTTFFLSSFLKQFKTKRYFPTKVRST 644


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,077,268
Number of Sequences: 237096
Number of extensions: 1245355
Number of successful extensions: 1398
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)