Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30981
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 104 8e-23
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 80 2e-15
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 74 1e-13
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 63 3e-10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 63 3e-10
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 60 2e-09
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 57 1e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 55 5e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 40 0.002
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 39 0.005
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.014
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.10
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 33 0.18
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 0.71
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.94
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 31 1.2
SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14) 30 1.6
SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.6
SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12) 30 2.2
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 30 2.2
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 30 2.2
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0) 29 3.8
SB_56931| Best HMM Match : AFP (HMM E-Value=0.0013) 29 5.0
SB_48032| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 6.6
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 6.6
SB_37088| Best HMM Match : AFP (HMM E-Value=2.2) 28 6.6
SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 28 6.6
SB_30246| Best HMM Match : IspA (HMM E-Value=0.39) 28 6.6
SB_26040| Best HMM Match : AFP (HMM E-Value=5.5) 28 6.6
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 104 bits (249), Expect = 8e-23
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 434
AKVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+GPR+S+GI++YM+ Q GPSS E+
Sbjct: 594 AKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEI 653
Query: 435 LTVADFE-AFTSKDEVVVVGF 494
+V E + VVVGF
Sbjct: 654 KSVDHLEKKLDDAESNVVVGF 674
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +1
Query: 61 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDD 240
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA LK +D
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 588
Query: 241 PPVALLK 261
PPV L K
Sbjct: 589 PPVPLAK 595
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = +2
Query: 509 DLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFLRLIWLAFDG 685
DLK F++TA+++R+ +FAH+S +VLEK YKN +V++RPK L K L ++A+ G
Sbjct: 680 DLKNAFMRTANEMRDSFSFAHASVTDVLEKYNYKNQIVVFRPKHLHTK-LEPSFIAYTG 737
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 261 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 434
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 434 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 492
Score = 42.7 bits (96), Expect = 3e-04
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 151 LVMFYAPWCGHCKRLKPEY 207
L+ FYAPWCGHCK L+P+Y
Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +1
Query: 61 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDD 240
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA LK +D
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
Query: 241 PPVALLK 261
PPV L K
Sbjct: 64 PPVPLAK 70
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = +1
Query: 46 VLLLGIIYLCKAAE----EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAV 213
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L PEYA
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAK 65
Query: 214 AAGLLKTDDPPVALLK 261
AAG LK++ + L K
Sbjct: 66 AAGQLKSEKSEIKLAK 81
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 434
AKVD T K E+F V GYPT+K F+ G+ SEY G R + IV ++ + GP +K+L
Sbjct: 80 AKVDATAETKLG-EKFQVQGYPTIKFFKDGK-PSEYAGGRTAPEIVSWLNKKTGPPAKDL 137
Query: 435 LTVADFEAFTSKDEVVVVGFF 497
T + F +K EV VVGFF
Sbjct: 138 ATADAMKDFITK-EVAVVGFF 157
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 103 LTDSDFSAVLSQHD-TALVMFYAPWCGHCKRLKP 201
L +F V D V FYAPWCGHCK+L P
Sbjct: 389 LCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAP 422
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRA 407
AK+D T + E V +PT+K F K + +YNG R + VK++ +
Sbjct: 440 AKMDSTA---NEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLES 487
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 294 EQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAF-TSK 470
+++ V GYPTLK+FRKG+ ++EY G R+ GI YMR+QVGPSS+ L ++ + F K
Sbjct: 244 QKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGIASYMRSQVGPSSRILSSLKAVQDFMKEK 302
Query: 471 DEVVVVGFF 497
D+V ++GFF
Sbjct: 303 DDVTIMGFF 311
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +1
Query: 85 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALLK 261
E+DV L +F V+ +++ LV FYAPWCGHCK L PEYA AA +K +DPPV K
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAK 118
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE- 431
AK+D T ++F VSGYPTLKIFRKG EY GPRE +GIV+YM+ Q P+ K
Sbjct: 117 AKMDATVAS-DIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESGIVEYMKKQSDPNWKPP 174
Query: 432 -----LLTVADFEAFTSKDEVVVVGFF 497
LT +F +++ +++V FF
Sbjct: 175 PVAALTLTKENFTEVVNRESLMLVEFF 201
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 97 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVAL 255
L LT +F+ V+++ LV F+APWCGHCK+L PEY AA L+ DPP+ L
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPL 231
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 76 KAAEEDVLDLTDSDFSAVLSQ-HDTALVMFYAPWCG 180
K+ +E V + F +++ L+ FYAPWCG
Sbjct: 521 KSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG 556
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 85 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLK 231
+EDV++LTD++F VL+ D LV F+APWCGHC+RL PE+A AA LK
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELK 127
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +3
Query: 288 TCEQFSVSGYPTLKIFRKGELSS----EYNGPRESNGIVKY 398
T ++ V GYPT+K+F G +S +Y G R ++ I++Y
Sbjct: 143 TASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQY 183
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 300 FSVSGYPTLKIFRKGELS-SEYNGPRESNGIV 392
+++ G+PT+KIF + S +YNG R + GIV
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +1
Query: 91 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVAL 255
+V+ L D F ++++ + LVMFYAPWCGHCK +KPEY AA LK + P L
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVL 137
Score = 54.8 bits (126), Expect = 7e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +1
Query: 91 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 219
+V L+D+ F + + + LVMFYAPWCGHCK+ KPE AA
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 34.7 bits (76), Expect = 0.076
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 151 LVMFYAPWCGHCKRLKPEYAVAA 219
+++ Y CG+CKR KPE+A AA
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAA 25
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 91 DVLDLTDSDFSAVLSQHDTALVMFYAP 171
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 AAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDP 243
+AEED V L SDF L+ + LVMFYAPWCGHCK KP+Y AA K D P
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFK-DQP 197
Score = 58.0 bits (134), Expect = 7e-09
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 85 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDD 240
+ V+ LTD + H+ LVM++APWCGHC +KP Y AA +L +D
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDED 100
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +3
Query: 225 FKDR*PSGGAAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMR 404
FKD+ P+ AK+DCT+ G C++ V+GYPTL+ + G+ EY+G R + ++ +M
Sbjct: 193 FKDQ-PNRVFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFME 250
Query: 405 AQVGPSS 425
P S
Sbjct: 251 EPPLPLS 257
Score = 34.7 bits (76), Expect = 0.076
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 246 GGAAKVDCTEGGKSTCEQFSVSGYPT 323
G A VDCTE K+TC Q + GYPT
Sbjct: 18 GALAAVDCTES-KNTCNQRDIKGYPT 42
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 401
A VDCT+ K ++ +++GYPT+K++ K +++ E + +VK +
Sbjct: 106 AAVDCTKH-KDVAKKVALAGYPTVKLY-KASNTAKAASAEEDSSLVKQL 152
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +1
Query: 31 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 207
G++ F L L + + + V+DLT +F V++ ALV FYAPWCGHCK+L P Y
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVG 416
AKVD +G + +F V G+PT+K F KG + EYNG R+ N +K++ + G
Sbjct: 77 AKVDA-DGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 85 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYA-VAAGLLKTDDPPVALLK 261
E +L+L DS+F + +H LV FYAPWC HCK++ P+Y VA LL V L K
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAK 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 82 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALLK 261
A VL+L D +F+ + +++ LV FYAPWC C+RL P + AA L+ ++P + K
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAK 108
Query: 262 *TVRKV--ARVLVNNSLCPD 315
+ + +VL +N + D
Sbjct: 109 -VIYSIDECKVLCDNLMASD 127
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 AKVDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 395
AKVDC+ K TC++++V PT+ +F G+ E+ G + +K
Sbjct: 191 AKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIK 240
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 34 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYA 210
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+P+Y
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYE 62
Query: 211 VAA 219
AA
Sbjct: 63 KAA 65
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 AKVDCTEG-GKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 431
AKVDCT+ K C+ F + GYP++K+F+ G+ + +Y G R +V YM + +S++
Sbjct: 75 AKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 94 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLL 228
V DL +F ++ + D LV FYAPWC HC+ L P+ AA L
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANAL 66
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 261 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 434
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +1
Query: 118 FSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLK 231
F+ VL+ D +V FYAPWCG C R P+Y A +LK
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLK 481
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 64 IYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 219
++ ++ +V L DF S+V S V F+APWC C RL PEY AA
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 VDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLT 440
VDC + + C ++ V YP +F+K Y G ++ I + + V S+ L
Sbjct: 234 VDCKKSSE-ICNEYHVRKYPVAALFKKAGFEWHY-GRFTAHDIALFAKESVS-SNVHALG 290
Query: 441 VADF-EAFTSKDEVVVVGFF 497
DF + TS V FF
Sbjct: 291 PEDFPSSVTSPSRPFFVDFF 310
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/76 (18%), Positives = 33/76 (43%)
Frame = +3
Query: 249 GAAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK 428
G VDCT + C Q+++ YPT ++ + ++ G + I++++ + + +
Sbjct: 337 GFGTVDCTVHSQ-LCHQYNIRSYPTTILYNNSQ-PHQFIGHHNALDIIEFVEVEYPEAFR 394
Query: 429 ELLTVADFEAFTSKDE 476
D ++ E
Sbjct: 395 SAAFTGDIRVPCAQQE 410
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 434
A+V+C + C+ +++ YPT+K+FRKG Y GP +++ +VK + PS
Sbjct: 13 ARVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVKAVILLQQPSPIR- 70
Query: 435 LTVADFEAFTSKD 473
L+ D + F D
Sbjct: 71 LSEDDIDPFLKGD 83
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +1
Query: 118 FSAVLSQ--HDTAL--VMFYAPWCGHCKRLKPEYAVAAGLL 228
F+ VLS H++ L V FYAPWCG +R E+ +AA LL
Sbjct: 441 FAKVLSSFLHNSPLNFVFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 94 VLDLTDSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEYA 210
VL+L DS F+A L+ T LV+ F A WCG CK + P Y+
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYS 50
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 35.9 bits (79), Expect = 0.033
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +1
Query: 112 SDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 207
++F++V++ LV+ FYA WCG C+++KP++
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKF 52
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 106 TDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 201
TDS V++ L++FY PWCG C P
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 306 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 401
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 255 AKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 380
AKVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 22 AKVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 154 VMFYAPWCGHCKRLKP 201
V FYAPWC HC +L P
Sbjct: 111 VKFYAPWCIHCIKLAP 126
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 306 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 401
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 0.71
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 115 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 207
+F L ++ A + F A WCG C+ + P++
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKF 33
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 106 TDSDFSAVLSQHDT--ALVMFYAPWCGHCKRL 195
T +DF +LS A+V F+APW HC ++
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 505 SFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEESS 344
S S +P TTSS+ + + T S T + MY+T+ ++S YS E+S
Sbjct: 242 SISPSPNRTTSSMYETITVNTTTSISPSPNETTSSMYVTIAVNSTTSSYSFETS 295
>SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14)
Length = 596
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLAAPP 245
G L + +P N ++ GYPDT+N + V L S + P
Sbjct: 154 GILSQDTQTPLNNFYNTGYPDTQNTTCVPLEISASRLVPLTP 195
>SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 299 LFTSTLATFRTVYFSSATGGSSVFKRPAATAYSGFSL 189
+F + T +T Y S+ TG S FKRP T+ S F L
Sbjct: 232 VFINDNNTPQTTYNSTKTGIRSYFKRPVLTSQSSFRL 268
>SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 409
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 299 LFTSTLATFRTVYFSSATGGSSVFKRPAATAYSGFSL 189
+F + T +T Y S+ TG S FKRP T+ S F L
Sbjct: 232 VFINDNNTPQTTYNSTKTGIRSYFKRPVLTSQSSFRL 268
>SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12)
Length = 556
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDTEN
Sbjct: 71 GILTQDNQTPLNNFYNTGYPDTEN 94
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDTEN
Sbjct: 110 GILTQDNQTPLNNFYNTGYPDTEN 133
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 149 GILSQDTQTPLNNFYNTGYPDTQN 172
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 94 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 195
+++ T+ + + + FYAPW HC+R+
Sbjct: 28 IVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 109 DSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 207
DS FS + + + LV+ F A WCG CK + P +
Sbjct: 16 DSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -1
Query: 424 ELGPTWARMYLTMPLDSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPS-VQSTLAAP 248
E P R +LT + G S+E + D E ++LLPP+ T P
Sbjct: 1139 ESSPLAERKFLTAKSPAKGTKKSDEDCVIVYEIRAAKADRERAERLLLPPNFFNYTRGQP 1198
Query: 247 PEGHRSLKGRRLP 209
+G KG R P
Sbjct: 1199 CKGCFGCKGTRSP 1211
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 488 WILRKGVDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFLRLI 667
WI+ + D K E +K R + F H + L K ++P+ + + L +
Sbjct: 226 WIIVEDSDHKSELVKNLAS-RSGLNFTHLNYKTPLFLRRQKGEFRRFKPRGVYQRTLAIQ 284
Query: 668 WLAFDGGHRE 697
W+ + HRE
Sbjct: 285 WIRDNVNHRE 294
>SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0)
Length = 816
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 572 SSANEVLEKTGYKNNVVLYRPKRLQNKFLRLIWLAFDGGHREKCS 706
+S+ EVLEK G++ R KR L+ L + G REK S
Sbjct: 56 TSSTEVLEKLGWRTVADKLRKKRSDKNRLKAGDLVLNAGEREKGS 100
>SB_56931| Best HMM Match : AFP (HMM E-Value=0.0013)
Length = 383
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 397 YLTMPLDSLGPLYSEESSPFLNIFSVGYPDTEN 299
Y + G L + +P N ++ GYPDT+N
Sbjct: 148 YFCFTSRTTGILSQDTQTPLNNFYNTGYPDTQN 180
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 196 GILSQDTQTPLNNFYNTGYPDTQN 219
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 376 SLGPLYSEESSPFLNIFSVGYPDTEN 299
++G L + +P LN ++ GYPDT+N
Sbjct: 267 TIGILSQDTQTP-LNFYNTGYPDTQN 291
>SB_48032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 39 GILSQDAQTPLSNFYNTGYPDTQN 62
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.3 bits (60), Expect = 6.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 151 LVMFYAPWCGHCKRLKPEYA 210
+++ WCG CK L+P++A
Sbjct: 1 MILITKNWCGACKALRPKFA 20
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 94 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 189
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
>SB_37088| Best HMM Match : AFP (HMM E-Value=2.2)
Length = 227
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 34 GILSQDTQTPLNNFYNTGYPDTQN 57
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 112 GILSQDTQTPLNNFYNTGYPDTQN 135
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 73 GILSQDTQTPVNNFYNTGYPDTQN 96
>SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 439
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 75 GILSQDTQTPLNNFYNTGYPDTQN 98
>SB_30246| Best HMM Match : IspA (HMM E-Value=0.39)
Length = 1502
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 132 GILSQDTQTPLNNFYNTGYPDTQN 155
>SB_26040| Best HMM Match : AFP (HMM E-Value=5.5)
Length = 207
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 108 GILSQDTQTPLNNFYNTGYPDTQN 131
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 147 GILSQDTQTPLNNFYNTGYPDTQN 170
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 340 GILSQDTQTPLNNFYNTGYPDTQN 363
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 418 GILSQDTQTPLNNFYNTGYPDTQN 441
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 GPLYSEESSPFLNIFSVGYPDTEN 299
G L + +P N ++ GYPDT+N
Sbjct: 456 GILSQDTQTPLNNFYNTGYPDTQN 479
>SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 8 HRLNSKCSDH*SLFFYWA*FIYVKRPRRMFSILQIPTFR 124
HR +SKC+ H + FF W+ I+ P + I + F+
Sbjct: 179 HRTHSKCNQHANSFFPWSINIWNNLPGSITDIKEKGKFK 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,102,182
Number of Sequences: 59808
Number of extensions: 474253
Number of successful extensions: 1421
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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