Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30980
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   5.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   7.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 573 ILWVWNVPRNSVD 611
           ++ +WN+PR ++D
Sbjct: 436 LMEMWNIPRENID 448


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +1

Query: 286 EKGVSTEDTLEVEYLER 336
           ++ ++  DTL+++YLER
Sbjct: 34  DRPITFNDTLQMKYLER 50


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 279 LTRKRGIDRGHA*GRILGKVPCTNSTGLFNARRL 380
           L R+ G++R      +LGK+P T S  L +A+ L
Sbjct: 339 LFRETGLERLDVSHNLLGKLPLT-SLSLASAQTL 371


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +1

Query: 307 DTLEVEYLER 336
           DTLE++YLER
Sbjct: 41  DTLEMKYLER 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,260
Number of Sequences: 336
Number of extensions: 4089
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)