Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30980
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1163 - 24439976-24440023,24440562-24440597,24440932-244410... 58 5e-09
03_05_1069 + 30118930-30120120 34 0.13
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 32 0.40
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 32 0.53
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 32 0.53
07_03_0971 + 23038409-23039134,23040321-23040611 32 0.53
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 32 0.53
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 32 0.53
10_08_0810 + 20734490-20734606,20735182-20735433,20735521-207356... 31 0.70
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 31 0.93
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 31 0.93
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 31 1.2
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 30 2.2
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 30 2.2
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610... 30 2.2
07_01_0174 - 1227871-1228043,1228303-1228423,1228519-1228588,122... 29 2.8
05_07_0039 - 27239362-27239478,27240570-27241463 29 2.8
05_06_0264 + 26756337-26756411,26756494-26756594,26757196-267573... 29 2.8
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 29 2.8
01_07_0161 + 41574749-41576044 29 2.8
12_02_0393 - 18550972-18551562,18551864-18552005,18552164-185523... 29 3.8
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 29 3.8
01_04_0100 + 16017117-16017196,16017283-16017694 29 3.8
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 29 5.0
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525... 29 5.0
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 5.0
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 28 6.6
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 28 6.6
01_06_0930 + 33134385-33138257 28 6.6
01_06_0303 + 28324155-28325045,28326208-28326321 28 6.6
07_03_0153 - 14481421-14481506,14481933-14482111,14483046-144831... 28 8.7
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 28 8.7
01_07_0350 + 42941976-42942401,42942510-42942737,42943201-429433... 28 8.7
01_06_0997 + 33676441-33676758,33678223-33678314,33678443-336785... 28 8.7
>07_03_1163 -
24439976-24440023,24440562-24440597,24440932-24441018,
24441349-24441492,24441782-24441916,24442215-24442279,
24442395-24442477,24442607-24442642,24443343-24443449,
24443558-24443658,24443750-24443909
Length = 333
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 LAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQ-AHSSWILSGSYDNSLH 444
L E L KG+S E LE+EY++ +D HDDWVSAV ++ S++L+G YD
Sbjct: 76 LQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDGSNPSFVLTGCYDGLAR 135
Query: 445 IWSTKGQHKLAIPGHTSPV 501
IW + + GH+ +
Sbjct: 136 IWRDASECTHILEGHSDGI 154
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 412 ILSGSYDNSLHIWSTKGQHK 471
I SGS+DNS+ +WS +G +
Sbjct: 185 ICSGSWDNSIKLWSVEGSEE 204
>03_05_1069 + 30118930-30120120
Length = 396
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 370 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKL--AIPGHTSPVK 504
H V + A S +LSGS DN++++W G H + GHT P++
Sbjct: 265 HKKAVFCLAAAGSLLLSGSADNTIYVWRRDGGVHSCLSVLTGHTEPIR 312
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 388 AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPV 501
A H + + SGS+D ++ +W + G+ +P H+ PV
Sbjct: 120 AFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPV 158
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 406 SWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVK 504
S + SGS DN++HIWS G + GH+S VK
Sbjct: 138 STLASGSLDNTVHIWSMANGICTAVLRGHSSLVK 171
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 370 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKADHGFPSRAIKL 540
H D++ VQ H WI+S S D ++ IW+ + + +A+ GH V P + +
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVV 151
Query: 541 HLLVDLMIK 567
+D ++
Sbjct: 152 SASLDQTVR 160
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 400 HSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 501
+ +I+SGS DN ++IW +G++ L + GHT V
Sbjct: 274 NGKYIVSGSEDNCVYIWDLQGKNILQKLEGHTDTV 308
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 370 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKADHGFPSRAIKL 540
H D++ VQ H WI+S S D ++ IW+ + + +A+ GH V P + +
Sbjct: 92 HLDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVV 151
Query: 541 HLLVDLMIK 567
+D ++
Sbjct: 152 SASLDQTVR 160
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 370 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKADHGFPSRAIKL 540
H D++ VQ H WI+S S D ++ IW+ + + +A+ GH V P + +
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVV 151
Query: 541 HLLVDLMIK 567
+D ++
Sbjct: 152 SASLDQTVR 160
>10_08_0810 +
20734490-20734606,20735182-20735433,20735521-20735664,
20735774-20736493,20736955-20737177,20737463-20737523,
20738294-20738615
Length = 612
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 516 VSFQGDQATFVSGSHDQTAILWVWN 590
V F D T +SGS DQ +LW W+
Sbjct: 61 VGFNADGDTLISGSDDQMVMLWDWD 85
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 397 AHSSWILSGSYDNSLHIWSTKGQHKLA--IPGHTSPVKA 507
A S +LSGS D++L +W + HKL +PGH V A
Sbjct: 437 ADSRLLLSGSKDSTLKVWDIR-THKLKQDLPGHADEVYA 474
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 370 HDDWVSAVQAHSS--WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVK 504
H WV ++ S W +GS D ++ IW G KL + GH ++
Sbjct: 183 HLGWVRSIAFDPSNEWFCTGSADRTIKIWDLASGTLKLTLTGHIEQIR 230
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 516 VSFQGDQATFVSGSHDQTAILWVW 587
+SF D + +SGS D+ A+LW W
Sbjct: 92 ISFNEDGSLLLSGSDDRAAVLWNW 115
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 397 AHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKA 507
A S +LSGS D++L +W + + K +PGH V A
Sbjct: 386 ADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVYA 423
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 409 WILSGSYDNSLHIWSTKG-QHKLAIPGHTSPVKA 507
++ S SYD ++++WS + HK ++ GH + A
Sbjct: 571 FLFSSSYDKTINVWSLQDFSHKQSLKGHEHKITA 604
>01_05_0439 - 22159425-22159520,22160137-22160345,22161028-22161066,
22161196-22161356,22161447-22161518,22162002-22162183,
22162580-22162703,22164196-22164299,22165526-22165725,
22165838-22166069,22166156-22166239,22166329-22166386,
22166724-22166771,22167924-22168081,22168451-22168501,
22168585-22168658,22168760-22168835,22169685-22169729,
22169833-22169899,22169978-22170095,22170580-22170775,
22171551-22171640,22171985-22172039,22172755-22172975,
22173362-22173454,22173608-22173721,22173918-22173981,
22174081-22174181,22174306-22174447,22174528-22174729,
22174883-22174976,22176172-22176348
Length = 1248
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKADHGFPS 525
H W+ +++ I++GS D + +WS T+G + H P+ PS
Sbjct: 1076 HTKWIRSMRMTGETIITGSDDWTARVWSLTRGTCDAVLACHAGPILCVEYSPS 1128
>07_01_0174 -
1227871-1228043,1228303-1228423,1228519-1228588,
1228877-1228953,1229215-1229393,1229558-1229684,
1229849-1229861,1230351-1230378,1230426-1230516,
1230870-1230956,1231239-1231276,1231426-1231464,
1231553-1231699,1231899-1231958,1232033-1232111,
1232429-1232517,1232906-1232967,1233238-1233427,
1233929-1234068,1235813-1236147,1237086-1237133
Length = 730
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 412 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPV 501
I+S S D ++ +W+ GQ L + GHTS V
Sbjct: 121 IISSSMDCTIKVWALTGQPLLEMIGHTSLV 150
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 370 HDDWVSAVQAHSSWIL-SGSYDNSLHIW 450
H V +V AHSS ++ SGS D S IW
Sbjct: 146 HTSLVYSVDAHSSGVIVSGSEDRSAKIW 173
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +1
Query: 370 HDDWVSAVQAHSS----WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKA 507
H WVS V+ + I+SGS+D S+ +W+ T + + + GH V A
Sbjct: 165 HTGWVSCVRFSPNPMAPTIVSGSWDRSVKVWNLTNCKLRTKLEGHNGYVNA 215
>05_06_0264 +
26756337-26756411,26756494-26756594,26757196-26757369,
26757449-26757548,26757869-26758006,26758104-26758185,
26758631-26758680,26758748-26758873
Length = 281
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 385 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKADHGFPSRAI 534
+A +++SGS D +LH W+ ++A H P+ A P RA+
Sbjct: 212 AAFTPDGQYVISGSGDGTLHAWNINTIQEIACWNSHIGPITALKWAPRRAM 262
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 543 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGI 647
F SGS D L +W++ R C+ TY+GH +G+
Sbjct: 138 FASGSLDTN--LKIWDIRRKG--CIHTYKGHTRGV 168
>01_07_0161 + 41574749-41576044
Length = 431
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 370 HDDWVSAVQAHSSWILSGSYDNSLHIW 450
H D +S + H + SGS+D +L +W
Sbjct: 187 HADSISCLAVHDGVVYSGSWDKTLKVW 213
>12_02_0393 -
18550972-18551562,18551864-18552005,18552164-18552382,
18552733-18552828,18552923-18553035,18553299-18553510,
18553603-18553700,18554283-18554314,18554984-18555068,
18555853-18555914
Length = 549
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 268 LAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNS 438
L + L +ST EVEY+ +FP + D L H + + S +L Y S
Sbjct: 147 LKQQLLSNKLSTSAQSEVEYVLKFPLHSTLDRLEHRRNIEQFKVEGSKVLKSGYCGS 203
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 516 VSFQGDQATFVSGSHDQTAILWVWNV-PRNSVDCMITYRGHDKGIEM 653
VS+ + + S D++ +W+W + P N +C+ +GH + ++M
Sbjct: 122 VSWSASGSLLATCSRDKS--VWIWEMQPGNEYECVSVQQGHTQDVKM 166
>01_04_0100 + 16017117-16017196,16017283-16017694
Length = 163
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 534 QATFVSGSHDQTAILWVWNVPRNSVDCMITYRG 632
+ T V GSH ++W W++ ++VD + G
Sbjct: 131 RGTLVQGSHMSAELVWWWSLGASAVDSQVVSSG 163
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 412 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPV 501
+ +GSYD IW++ G+ K + H P+
Sbjct: 343 LATGSYDGQARIWNSDGELKQTLFKHKGPI 372
>04_04_0589 +
26449184-26450500,26452220-26452310,26452428-26452585,
26452670-26452768,26453296-26453345,26453654-26453705,
26453773-26454058,26454286-26454400,26454938-26455020,
26455381-26455466
Length = 778
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 256 LCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAH---SSWILSGS 426
LC S +++L S + T+++ ++ R H D+V+ +Q + + +SGS
Sbjct: 433 LCWSKSQYLLSS--SMDKTVKLWHMSRTSC---LKTFSHSDYVTCIQFNPVDDRYFISGS 487
Query: 427 YDNSLHIWSTKGQ 465
D + IWS G+
Sbjct: 488 LDEKVRIWSIPGR 500
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 277 HLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSL 441
HL V D +E LE P+ + L + + SA+ + SW+L GSY +L
Sbjct: 936 HLSWNDVYGMDVSHLEILEGLRPPSQLEDLTIEGYKSAM--YPSWLLDGSYFENL 988
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 247 WRVLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAH---SSWIL 417
W + L +K V DT L+ FP H+D+V+ VQ + + +
Sbjct: 540 WSMYSQLLLSSSMDKTVRLWDTEAKACLKLFP---------HNDYVTCVQFNPVDDGYFI 590
Query: 418 SGSYDNSLHIWS 453
SGS D+ + IWS
Sbjct: 591 SGSLDSKVRIWS 602
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 409 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPV 501
WI+SG DNS+ IW T G+ H P+
Sbjct: 162 WIVSGGSDNSVKIWDLTAGKLLHDFRNHEGPI 193
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 277 HLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSL 441
HL V D +E LE P+ + L + + S + + SW+L GSY +L
Sbjct: 754 HLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTM--YPSWLLDGSYFENL 806
>01_06_0303 + 28324155-28325045,28326208-28326321
Length = 334
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +1
Query: 370 HDDWVSAVQ----AHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKA 507
H+ WVS V+ I+SGS+D ++ +W+ T + + + GH V A
Sbjct: 164 HNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNA 214
>07_03_0153 -
14481421-14481506,14481933-14482111,14483046-14483130,
14483301-14483499,14484222-14484292,14484380-14484486,
14484571-14484703,14484870-14485020,14485147-14485249,
14485330-14485438,14485587-14485746,14486293-14486394,
14486892-14487009,14487596-14487750,14487850-14487948,
14488078-14488167
Length = 648
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 388 AVQAHSSWILSGSYDNSLHIWSTK 459
+V+A WI SGS D ++ +W +
Sbjct: 352 SVEATGQWIASGSSDGTIRVWEVE 375
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 397 AHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPV 501
+ ++I SGS D+ ++IW G +PGHT V
Sbjct: 455 SEQAFIASGSEDSQIYIWHRATGDLIETLPGHTGTV 490
>01_07_0350 +
42941976-42942401,42942510-42942737,42943201-42943380,
42943515-42943730,42943854-42943955,42944377-42944439,
42944526-42944594,42945662-42945730,42947003-42947069,
42947449-42947514,42947600-42947697,42947820-42947857,
42947929-42948016,42948101-42948373,42948470-42948535,
42948624-42948779
Length = 734
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 ILSGSYDNSLHIWSTKGQHK-LAIPGHTSPVKA 507
+ SG DN L +W+ + Q L + HT+ VKA
Sbjct: 291 LASGGNDNQLLVWNQRSQQPILRLTEHTAAVKA 323
>01_06_0997 +
33676441-33676758,33678223-33678314,33678443-33678540,
33678824-33678979,33679106-33679731,33679826-33679896,
33679987-33680241,33680337-33680454,33680595-33680766,
33680854-33681395
Length = 815
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 528 GDQATFVSGSHDQTAILWVWNVPRNSVDCMITY 626
G + T V G H ++W W++ ++VD + Y
Sbjct: 76 GRRGTPVQGFHMSAELVWWWSIGVSAVDSQVLY 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,554,549
Number of Sequences: 37544
Number of extensions: 439475
Number of successful extensions: 1191
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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