Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30975
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0092 + 11057604-11057717,11058998-11059531,11060036-110601... 41 9e-04
03_06_0583 + 34901636-34901721,34901805-34901902,34902029-349021... 40 0.003
08_01_0817 - 7941225-7941330,7941456-7942384,7943498-7943574,794... 38 0.011
07_03_0587 + 19708841-19709282,19709693-19709883,19710429-197105... 35 0.056
02_05_1268 - 35345283-35345462,35345577-35345636,35345719-353460... 35 0.074
04_04_0287 - 24156285-24156389,24156477-24156596,24156654-241567... 34 0.13
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 33 0.17
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 33 0.17
12_02_0663 + 21653536-21653541,21654027-21654212,21654316-216543... 32 0.40
09_02_0054 - 3678467-3679435,3680578-3680601 31 0.69
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 30 1.6
01_01_0453 - 3361460-3361549,3361660-3361846,3362038-3362139,336... 29 2.8
03_05_0999 - 29583959-29584711,29584797-29585021,29585163-295853... 28 6.4
10_07_0133 + 13274190-13274317,13274533-13276371,13277064-132772... 28 8.5
>01_02_0092 +
11057604-11057717,11058998-11059531,11060036-11060101,
11060201-11060367,11060445-11060592,11060673-11060763,
11060850-11061199,11061284-11061388,11061490-11061789
Length = 624
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 APLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKT-QLPHPLY 178
+P R H+AV + G +V+V GG + + D W LD+A+ WT ++ Q P +
Sbjct: 223 SPGVRAGHAAVGV----GSKVYVIGGVGDKQYYSDAWILDVANRSWTQLEICGQQPQGRF 278
Query: 179 FHSSTVTSSGCMYIFGGIEPKEDANLEIIFCIKYGYVYQN 298
HS+ V ++ + I+GG +++ L + ++ G + N
Sbjct: 279 SHSAVVLNTD-IAIYGGC-GEDERPLNELLILQLGSEHPN 316
Score = 31.1 bits (67), Expect = 0.91
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMK-KTQLPHPLYF 181
P R H A + G ++ V GG++G D+ LD+ +WT K P P
Sbjct: 69 PGTRDSHGAALV----GHRMMVFGGTNGSKKVNDLHVLDLRTKEWTKPPCKGTPPSPRES 124
Query: 182 HSSTVTSSGC--MYIFGG 229
H+ T GC + +FGG
Sbjct: 125 HTVT-ACGGCDRLVVFGG 141
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTL--MKKTQLPHPLY 178
P PR+ H+ + + VF G D+ LD+A + W+ +K +P P
Sbjct: 119 PSPRESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVKGDVVPAPRD 178
Query: 179 FHSSTVTSSGCMYIFGG 229
H + S + ++GG
Sbjct: 179 SHGAVAVGSR-LVVYGG 194
>03_06_0583 +
34901636-34901721,34901805-34901902,34902029-34902167,
34902262-34902290,34902406-34902502,34902593-34902648,
34902759-34902866,34902988-34903044,34905585-34905679,
34905822-34905998,34906086-34906189,34906595-34906664,
34906774-34906833
Length = 391
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWT-LMKKTQLPHPLYF 181
P PR H A+ ID +F+ GG G D W LD QW+ L LP P F
Sbjct: 82 PSPRAFHVAIVIDC----NMFIFGGRSGGKRLGDFWMLDTDIWQWSELTGFGDLPSPREF 137
Query: 182 HSSTVTSSGCMYIFGGIEPKE 244
+++ + + ++GG + K+
Sbjct: 138 AAASAIGNRKIVMYGGWDGKK 158
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKT-QLPHPLYF 181
P PR+ +A I + ++ + GG DG+ D++ +D L+WT + T +P P
Sbjct: 132 PSPREFAAASAIGNR---KIVMYGGWDGKKWLSDVYIMDTMSLEWTELSVTGSVPPPRCG 188
Query: 182 HSSTVTSSGCMYIFGG 229
HS+T+ + +FGG
Sbjct: 189 HSATMIEKR-LLVFGG 203
>08_01_0817 -
7941225-7941330,7941456-7942384,7943498-7943574,
7944911-7945286
Length = 495
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVF-EDIWRLDIADL-------------QWT 142
P PR HSA + G ++ V GG D Q +D W LD+ L W
Sbjct: 359 PFPRVGHSATLV---LGGKILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWK 415
Query: 143 LMK-KTQLPHPLYFHSSTVTSSGC-MYIFGGI 232
++ Q P+ FH + V +SGC +YIFGG+
Sbjct: 416 KLRIDGQCPNYRSFHGACVDTSGCHVYIFGGM 447
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADL--QWTLMKKT------Q 160
PL R H+ I V +F GS+ V D+W LDI + +W +K +
Sbjct: 300 PLSRSGHTLTWIGGSRMV-LFGGRGSEFD-VLNDVWLLDINERYPKWKELKYDLSSVLGE 357
Query: 161 LPHPLYFHSSTVTSSGCMYIFGG 229
+P P HS+T+ G + ++GG
Sbjct: 358 MPFPRVGHSATLVLGGKILVYGG 380
>07_03_0587 +
19708841-19709282,19709693-19709883,19710429-19710568,
19710955-19711380,19711540-19712685,19712805-19712934,
19713257-19713492,19713575-19713710,19713793-19713869,
19714692-19714798,19714896-19714996
Length = 1043
Score = 35.1 bits (77), Expect = 0.056
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKT-QLPHPLYF 181
P R HS V G ++F+ GG DGQ D + D L+W + P P +
Sbjct: 447 PCARHSHSLVSY----GSKLFLFGGHDGQRALNDFYSFDTTTLKWNKENTNGKAPSPRFS 502
Query: 182 HSSTVTSSGCMYIFGGIEPKEDANLEIIFCIKY 280
H + + I GG +E + + +K+
Sbjct: 503 HCMFIYKD-YLGILGGCPIRESSQEIALLNLKH 534
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 APLPRKCHSAVQIDSPNGVQVFVAGGSDGQA-VFEDIWRLDIADLQWTLMK-KTQLPHPL 175
+P PR H+ + G ++V GG G + + DIW L+ ++ +W+ + P
Sbjct: 345 SPSPRMGHTITVV----GNDIYVVGGRSGPSEILNDIWVLERSNNRWSKVDCSGDFFRPR 400
Query: 176 YFHSSTVTSSGCMYIFGGI 232
+ H++ +Y+FGG+
Sbjct: 401 HRHAAAAVDRK-VYVFGGL 418
>02_05_1268 -
35345283-35345462,35345577-35345636,35345719-35346042,
35346266-35346349,35346784-35346872,35346959-35347073,
35347534-35347660,35347743-35347882,35348010-35348071,
35348769-35348838,35348947-35349066,35349155-35349232,
35349738-35349968,35350110-35350220
Length = 596
Score = 34.7 bits (76), Expect = 0.074
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKTQLPH--PLY 178
P PR HSA + + + +F GGS F DI+ LD+ ++W+ TQ H P
Sbjct: 275 PAPRYDHSAA-VYADQYLLIF--GGSSHSTCFSDIYLLDLQTMEWS-QPDTQGAHINPRS 330
Query: 179 FHSSTVTSSGCMYIFGG 229
H+ T+ YI GG
Sbjct: 331 GHAGTMIDEN-WYIVGG 346
>04_04_0287 -
24156285-24156389,24156477-24156596,24156654-24156740,
24156905-24157057,24157516-24157635,24157788-24157949,
24158029-24158247,24158574-24158616,24159147-24159210,
24159353-24159458,24159585-24159704,24159831-24159911,
24160008-24160050,24160308-24160369,24160477-24160563,
24161004-24161050,24161144-24161276,24161419-24161487,
24161924-24162010,24162317-24162448
Length = 679
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 2 APLPRKCHSAVQIDSPNGVQVFVAGGS--DGQA--VFEDIWRLDIADLQWTLMKKTQLPH 169
AP PR + ++ I+ ++ + GG +G V+ D++R D+ +W L+ P
Sbjct: 65 APSPRS-NCSLTINPLKDTELVLYGGEFYNGSKTFVYGDLYRYDVEKNEWKLVSSPNSPP 123
Query: 170 PLYFHSSTVTSSGCMYIFGG 229
P H TV +Y+FGG
Sbjct: 124 PRSAH-QTVAWKNNIYMFGG 142
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 80 SDGQAVFEDIWRLDIADLQWTLMKKTQLPHPLYFHSSTVTSSGCMYIFGGI---EPKEDA 250
S+ V D+W LD +W +KKT +P S +FGG+ E + D
Sbjct: 266 SEKGTVHADMWTLDPRTWEWNKVKKTGMPPGPRAGFSMCVHKKRAVLFGGVVDMEIEGDV 325
Query: 251 NLEIIFCIKYGYVYQN 298
+ + YG+ N
Sbjct: 326 IMSMFMNELYGFQLDN 341
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 74 GGSDGQAVFEDIWRLDIA--DLQW-TLMKKTQLPHPLYFHSSTVTSSGCMYIFGG 229
GG+DG+ D+W LD A +W L + + P P + +++ S G + + GG
Sbjct: 264 GGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 318
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 74 GGSDGQAVFEDIWRLDIA--DLQW-TLMKKTQLPHPLYFHSSTVTSSGCMYIFGG 229
GG+DG+ D+W LD A +W L + + P P + +++ S G + + GG
Sbjct: 240 GGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 294
>12_02_0663 +
21653536-21653541,21654027-21654212,21654316-21654393,
21654581-21654694,21654799-21654865,21654954-21655015,
21655123-21655262,21655552-21655678,21655758-21655872,
21656111-21656199,21656593-21656733,21657067-21657192,
21657655-21657714,21658285-21658443
Length = 489
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 53 GVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKTQL-PHPLYFHSSTVTSSGCMYIFGG 229
G V G DG+++ D+ LD+ + W + T P P H++ + + IFGG
Sbjct: 184 GTLVVFGGEGDGRSLLNDLHVLDLETMTWDEFETTGTPPSPRSEHAAACYADRYLLIFGG 243
>09_02_0054 - 3678467-3679435,3680578-3680601
Length = 330
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 11 PRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQW 139
P + + ++ D+ G +V+V GG D+W D+A +W
Sbjct: 121 PHRSYHSMVADAAGGGKVYVFGGCGDAGRLNDLWAYDVAAGRW 163
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 PLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKTQL-PHPLYF 181
P PR H+A + + +F GG F D+ LD+ ++W+ K+ L P P
Sbjct: 341 PPPRSDHAAA-CHADRYLLIF--GGGSHATCFNDLHVLDLQTMEWSRPKQQGLAPSPRAG 397
Query: 182 HSSTVTSSGCMYIFGG 229
H+ YI GG
Sbjct: 398 HAGATVGEN-WYIVGG 412
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 53 GVQVFVAGGSDGQ-AVFEDIWRLDIADLQWTLMKKTQLPHPLYFHSSTVTSSGCMYIFGG 229
G + + GG D + + D+ LD+ + W + P P H++ + + IFGG
Sbjct: 303 GTTLVLFGGEDAKRCLLNDLHILDLETMTWDDVDAIGTPPPRSDHAAACHADRYLLIFGG 362
>01_01_0453 -
3361460-3361549,3361660-3361846,3362038-3362139,
3362239-3362306,3362976-3363175,3363253-3363595,
3363837-3363893,3364011-3364727,3364805-3365007,
3365171-3365297
Length = 697
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 50 NGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKTQLPHPLYFHSSTVTSSGCMYIFGG 229
NG ++F GG DG F ++ D A +W Q P + +G +Y+ GG
Sbjct: 512 NG-KIFAIGGGDGSQSFSEVEMFDPAVGKWIYSLSMQQPR---CAPAAAELNGVLYVIGG 567
Query: 230 IE 235
+
Sbjct: 568 YD 569
>03_05_0999 -
29583959-29584711,29584797-29585021,29585163-29585360,
29585472-29586056
Length = 586
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 300 EFWYT*PY--FIQNIISKFASSLGSIPPNIYMQPEDVTVDEWKYKG 169
EF+Y P F+Q +I +A LG++ PN ++ V VD + G
Sbjct: 421 EFFYNNPLLSFVQAVIGPYADELGNVLPNA-VEGVGVPVDPLAFAG 465
>10_07_0133 +
13274190-13274317,13274533-13276371,13277064-13277253,
13277442-13277657
Length = 790
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 534 FTTIFR*CCSYIVMIKIIALEEK 466
F T R CC+Y+ + IIA +EK
Sbjct: 452 FQTSSRKCCNYVTALSIIAWDEK 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,615,300
Number of Sequences: 37544
Number of extensions: 376061
Number of successful extensions: 798
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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