Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30974
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13492-1|CAA73884.2|  917|Homo sapiens smoothelin-B protein.           32   2.8  
AY061972-1|AAL36150.1|  940|Homo sapiens smoothelin-B3 protein.        32   2.8  
AY061971-1|AAL36149.1|  915|Homo sapiens smoothelin-B2 protein.        32   2.8  
AF115570-1|AAF03562.1|  917|Homo sapiens smoothelin-B protein.         32   2.8  
AB086355-1|BAC00823.1|  424|Homo sapiens kringle-containing prot...    32   2.8  
AB086405-1|BAC00872.1|  462|Homo sapiens kringle-containing tran...    31   3.6  

>Y13492-1|CAA73884.2|  917|Homo sapiens smoothelin-B protein.
          Length = 917

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
 Frame = +2

Query: 338 TPCVPLVPCENSLFFVVVDGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFK-----RNT 502
           +P  PL P E       V G       P  + +PE Q+S  +P T  +   K     + T
Sbjct: 213 SPEPPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKET 272

Query: 503 P*VHVPPRGEAHPRASGGAGGRGVQ 577
           P    PPRG +  + +  AG R  Q
Sbjct: 273 PAAQSPPRGPSDTKRADVAGPRPCQ 297


>AY061972-1|AAL36150.1|  940|Homo sapiens smoothelin-B3 protein.
          Length = 940

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
 Frame = +2

Query: 338 TPCVPLVPCENSLFFVVVDGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFK-----RNT 502
           +P  PL P E       V G       P  + +PE Q+S  +P T  +   K     + T
Sbjct: 213 SPEPPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKET 272

Query: 503 P*VHVPPRGEAHPRASGGAGGRGVQ 577
           P    PPRG +  + +  AG R  Q
Sbjct: 273 PAAQSPPRGPSDTKRADVAGPRPCQ 297


>AY061971-1|AAL36149.1|  915|Homo sapiens smoothelin-B2 protein.
          Length = 915

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
 Frame = +2

Query: 338 TPCVPLVPCENSLFFVVVDGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFK-----RNT 502
           +P  PL P E       V G       P  + +PE Q+S  +P T  +   K     + T
Sbjct: 213 SPEPPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKET 272

Query: 503 P*VHVPPRGEAHPRASGGAGGRGVQ 577
           P    PPRG +  + +  AG R  Q
Sbjct: 273 PAAQSPPRGPSDTKRADVAGPRPCQ 297


>AF115570-1|AAF03562.1|  917|Homo sapiens smoothelin-B protein.
          Length = 917

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
 Frame = +2

Query: 338 TPCVPLVPCENSLFFVVVDGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFK-----RNT 502
           +P  PL P E       V G       P  + +PE Q+S  +P T  +   K     + T
Sbjct: 213 SPEPPLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKET 272

Query: 503 P*VHVPPRGEAHPRASGGAGGRGVQ 577
           P    PPRG +  + +  AG R  Q
Sbjct: 273 PAAQSPPRGPSDTKRADVAGPRPCQ 297


>AB086355-1|BAC00823.1|  424|Homo sapiens kringle-containing protein
           protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = -1

Query: 576 CTPRPPAPPDALG*ASPLGGT*TYGVFLLKLVLKIVRGTQRLCCVSG 436
           C+PRP APP A+G  + +  T T    LL L+L ++R  +R C   G
Sbjct: 354 CSPRPGAPPAAIG--ARVFSTVTAVSVLLLLLLGLLRPLRRRCGALG 398


>AB086405-1|BAC00872.1|  462|Homo sapiens kringle-containing
           transmembrane protein protein.
          Length = 462

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -1

Query: 576 CTPRPPAPPDALG*ASPLGGT*TYGVFLLKLVLKIVRGTQRLCCV 442
           C+PRP APP A+G  + +  T T    LL L+L ++R  +R  C+
Sbjct: 354 CSPRPGAPPAAIG--ARVFSTVTAVSVLLLLLLGLLRPLRRRSCL 396


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,122,206
Number of Sequences: 237096
Number of extensions: 2035118
Number of successful extensions: 5951
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5937
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)