Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30974
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula...    29   7.4  
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula...    29   7.4  
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula...    29   7.4  
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P...    29   7.4  
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P...    29   7.4  
AE014296-1967|AAF50051.1|  566|Drosophila melanogaster CG11711-P...    26   8.6  
BT001864-1|AAN71631.1|  550|Drosophila melanogaster RH70633p pro...    26   8.6  
AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p pro...    29   9.7  
AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA ...    29   9.7  

>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
           matrix protein papilin3 protein.
          Length = 2898

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 546 RRGARGDEGCSGNAERMYSCN 608
           RR  RG+  CSG + R +SCN
Sbjct: 86  RRDDRGEAVCSGGSRRYFSCN 106


>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
           matrix protein papilin2 protein.
          Length = 2776

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 546 RRGARGDEGCSGNAERMYSCN 608
           RR  RG+  CSG + R +SCN
Sbjct: 86  RRDDRGEAVCSGGSRRYFSCN 106


>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
           matrix protein papilinprotein.
          Length = 2174

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 546 RRGARGDEGCSGNAERMYSCN 608
           RR  RG+  CSG + R +SCN
Sbjct: 86  RRDDRGEAVCSGGSRRYFSCN 106


>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
           isoform A protein.
          Length = 2894

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 546 RRGARGDEGCSGNAERMYSCN 608
           RR  RG+  CSG + R +SCN
Sbjct: 86  RRDDRGEAVCSGGSRRYFSCN 106


>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
           isoform B protein.
          Length = 2772

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 546 RRGARGDEGCSGNAERMYSCN 608
           RR  RG+  CSG + R +SCN
Sbjct: 86  RRDDRGEAVCSGGSRRYFSCN 106


>AE014296-1967|AAF50051.1|  566|Drosophila melanogaster CG11711-PD,
           isoform D protein.
          Length = 566

 Score = 26.2 bits (55), Expect(2) = 8.6
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +2

Query: 392 DGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFKRNTP*VHVPPRGEAHPRASGGAGGRG 571
           DG       P T++TP    S     + F   F   +   H+P R      A+G  GG+G
Sbjct: 33  DGSSTAPQTP-TASTPRPSSSHSSLSSTFAATFLHASS-RHIPGRAVPRQNANGQNGGKG 90



 Score = 21.0 bits (42), Expect(2) = 8.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 545 ASGGAGGRGVQ 577
           ASGG GG G Q
Sbjct: 107 ASGGTGGTGAQ 117


>BT001864-1|AAN71631.1|  550|Drosophila melanogaster RH70633p
           protein.
          Length = 550

 Score = 26.2 bits (55), Expect(2) = 8.6
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +2

Query: 392 DGKRVYDSRPWTSATPETQQSRCVPRTIFKTNFKRNTP*VHVPPRGEAHPRASGGAGGRG 571
           DG       P T++TP    S     + F   F   +   H+P R      A+G  GG+G
Sbjct: 33  DGSSTAPQTP-TASTPRPSSSHSSLSSAFAATFLHASS-RHIPGRAVPRQNANGQNGGKG 90



 Score = 21.0 bits (42), Expect(2) = 8.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 545 ASGGAGGRGVQ 577
           ASGG GG G Q
Sbjct: 107 ASGGTGGTGAQ 117


>AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p
           protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 165 DFHPLQNVGLTRNLVYLLGPMT 100
           D HPL N+ LTR++ YL   +T
Sbjct: 14  DVHPLHNIDLTRDVAYLKAVVT 35


>AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA
           protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 165 DFHPLQNVGLTRNLVYLLGPMT 100
           D HPL N+ LTR++ YL   +T
Sbjct: 14  DVHPLHNIDLTRDVAYLKAVVT 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,959,762
Number of Sequences: 53049
Number of extensions: 665597
Number of successful extensions: 2405
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)