Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30972
         (617 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D576D8 Cluster: PREDICTED: hypothetical protein;...    42   0.016
UniRef50_Q7JVV8 Cluster: LP02570p; n=9; melanogaster subgroup|Re...    40   0.063
UniRef50_Q6BD40 Cluster: CG10200; n=6; Sophophora|Rep: CG10200 -...    38   0.14 
UniRef50_Q55VH6 Cluster: Putative uncharacterized protein; n=2; ...    35   1.4  
UniRef50_Q5TUF2 Cluster: ENSANGP00000029381; n=2; Culicidae|Rep:...    35   1.8  
UniRef50_Q6ME89 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_UPI0000D9E16C Cluster: PREDICTED: hypothetical protein;...    34   3.1  
UniRef50_A1SM34 Cluster: 3-isopropylmalate dehydrogenase; n=1; N...    34   3.1  
UniRef50_Q2RLV7 Cluster: Carboxyl-terminal protease precursor; n...    33   5.5  
UniRef50_Q98UD6 Cluster: Putative uncharacterized protein; n=2; ...    32   9.5  
UniRef50_Q8YQ99 Cluster: Cobyrinic acid a,c-diamide synthase; n=...    32   9.5  
UniRef50_A6NQI3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q94HB0 Cluster: Putative uncharacterized protein OSJNBb...    32   9.5  

>UniRef50_UPI0000D576D8 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 221

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 37  VLLAAILGTALAVGQYYVPRSYYTIDSDGHESQPVPLRRLRRSLNPYP-YSYNQGAEGSA 213
           ++  A++   LA    +VP+SYY ID DGH+S  V  R  +R +  +P +   +G   S+
Sbjct: 7   LIFVALVSCVLAYSGEFVPKSYYIIDQDGHKSDVVYFRS-KRDVESFPLFRVKRGGGSSS 65

Query: 214 DVSGGALTRTKAKA 255
                A + + + A
Sbjct: 66  SSQSSASSSSSSGA 79


>UniRef50_Q7JVV8 Cluster: LP02570p; n=9; melanogaster subgroup|Rep:
           LP02570p - Drosophila melanogaster (Fruit fly)
          Length = 202

 Score = 39.5 bits (88), Expect = 0.063
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 22  ANLTFVLLAAILGTALAVGQYYVPRSYYTIDSDGHESQPVPLR-RLRRSLNPYPYSYNQG 198
           A +   L A    +A + GQ+ +PR+++T+DS+GH+S   P+   L R L     S +  
Sbjct: 4   AVIAIALFAITTASASSAGQF-LPRAFFTLDSEGHQSNVHPVNAHLLRRLRRQSSSSSSS 62

Query: 199 AEGSADVSGGALT 237
           +  S+   G   T
Sbjct: 63  SSSSSSSGGNVFT 75


>UniRef50_Q6BD40 Cluster: CG10200; n=6; Sophophora|Rep: CG10200 -
           Drosophila melanogaster (Fruit fly)
          Length = 162

 Score = 38.3 bits (85), Expect = 0.14
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 40  LLAAILGTALAVGQYYVPRSYYTIDSDGHESQPVPLR-RLRRSLNPYPYSYNQGAEGSAD 216
           L A    +A + GQ+ +PR+++T+DS+GH+S   P+   L R L     S +  +  S+ 
Sbjct: 2   LFAITTASASSAGQF-LPRAFFTLDSEGHQSNVHPVNAHLLRRLRRQSSSSSSSSSSSSS 60

Query: 217 VSGGALT 237
             G   T
Sbjct: 61  SGGNVFT 67


>UniRef50_Q55VH6 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 1067

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 406 SQPSPCFLLFNLPIYLRSQCLRTFRLSPNSPAGTPQSPTPLPRLLVIVRERPSPLYVL 233
           S PSP   +   PI + +       LSP++P   P  P P P LL+  +E P+  +++
Sbjct: 445 SVPSPVPGIVPSPIPVSASTSSAVPLSPHAPPPKPNLPNPPPFLLIAFKEHPTDKFLI 502


>UniRef50_Q5TUF2 Cluster: ENSANGP00000029381; n=2; Culicidae|Rep:
           ENSANGP00000029381 - Anopheles gambiae str. PEST
          Length = 149

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 10  NVQNANLTFVLLAAILGTALAVGQYYVPRSYYTIDSDGHES 132
           NV        LL A++ +    G +YVP++YYTID  G++S
Sbjct: 2   NVYCLTFALCLLFAVVSSEAETG-FYVPKAYYTIDEHGYKS 41


>UniRef50_Q6ME89 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative uncharacterized protein - Protochlamydia
           amoebophila (strain UWE25)
          Length = 823

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +1

Query: 19  NANLTFVLLAAILGTALAVGQYYVPRSYYTIDSDGHESQPVP-LRRLRRSL-NPYPYSYN 192
           N++L+  LL A    A ++  + +P+S   +DS+  E + +  LR L R L NP P    
Sbjct: 331 NSDLSHFLLIA--QPAPSIYYWLIPKSTIVVDSNAMELRTLKDLRTLNRLLANPEPLEGT 388

Query: 193 QGAEGSADVSGGALTR 240
            G + SA +  G LTR
Sbjct: 389 NGKDISALIKQGTLTR 404


>UniRef50_UPI0000D9E16C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 254

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +2

Query: 8   STSKMRTLLLFC*PRSLEPLSQ--WD---NITCRVPTTRSTPMGMSHNRYLCGD*GG 163
           S+S    L + C   ++E +    WD   N+T + P++  TP   +HNRY+ GD  G
Sbjct: 186 SSSSPEGLGMACHAGAMERMKAKPWDPKSNLTAKAPSSSGTPCRRAHNRYIFGDSDG 242


>UniRef50_A1SM34 Cluster: 3-isopropylmalate dehydrogenase; n=1;
           Nocardioides sp. JS614|Rep: 3-isopropylmalate
           dehydrogenase - Nocardioides sp. (strain BAA-499 /
           JS614)
          Length = 478

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -2

Query: 391 CFLLFNLPIYLRSQCLRTFRLSPNSPAGTPQSPTPLPRLLVIVRERPS 248
           C     LPI+L+S   RT R +  +P G P + TP  R       RPS
Sbjct: 52  CIGTARLPIHLKSTRERTDRCTTCTPTGVPPATTPTTRAATRTSPRPS 99


>UniRef50_Q2RLV7 Cluster: Carboxyl-terminal protease precursor; n=1;
           Moorella thermoacetica ATCC 39073|Rep: Carboxyl-terminal
           protease precursor - Moorella thermoacetica (strain ATCC
           39073)
          Length = 387

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +1

Query: 55  LGTALAVGQYYVPRSYYTIDSDGHESQPVPLRRLRRSLNPYPYSYNQGAEGSADVSGGAL 234
           L  A+ V  Y+VP+      +D   S+P+  R   + L P     N+G+  +A++  GA+
Sbjct: 240 LPAAVDVASYFVPQGPVVYIADQKTSEPLMARGYAQPL-PLVVLVNKGSASAAEIVAGAI 298

Query: 235 TRTKA 249
             TK+
Sbjct: 299 KDTKS 303


>UniRef50_Q98UD6 Cluster: Putative uncharacterized protein; n=2;
           Xenopus|Rep: Putative uncharacterized protein - Xenopus
           laevis (African clawed frog)
          Length = 145

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 79  QYYVPRSYYTIDSDGHESQPVPLRRLRRSLNPYPYSYNQGAEGSADV 219
           Q+ +    + I  DGH S   P +  ++++ PYPYS+ Q  + S  +
Sbjct: 7   QFTMENPGFEIQEDGH-SHTAPSKIPQKNIYPYPYSFEQSKKSSCSL 52


>UniRef50_Q8YQ99 Cluster: Cobyrinic acid a,c-diamide synthase; n=3;
           Cyanobacteria|Rep: Cobyrinic acid a,c-diamide synthase -
           Anabaena sp. (strain PCC 7120)
          Length = 514

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 340 TFRLSPN--SPAGTPQSPTPLPRLLVIVRERPSPLYVLKHL 224
           T R SPN  SP   PQSP P P  + + R+R    Y   +L
Sbjct: 275 TARFSPNPQSPIPNPQSPVPHPPKIAVARDRAFNFYYQDNL 315


>UniRef50_A6NQI3 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 508

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 28  LTFVLLAAILGTALAVGQYYVPRSYYTIDSDG 123
           L F+L A ++GTAL VG  Y P   Y +  DG
Sbjct: 69  LAFLLAAGVIGTALVVGTVYTPS--YVVSVDG 98


>UniRef50_Q94HB0 Cluster: Putative uncharacterized protein
           OSJNBb0048A17.25; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0048A17.25 - Oryza sativa subsp. japonica (Rice)
          Length = 306

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -2

Query: 358 RSQCLRTFRLSPNSPAGTPQSPTPLPRLLVIVRERPSPLYVLKHLR 221
           RS  +      P S    P SPT  PR ++  R RP P+  ++ +R
Sbjct: 212 RSSAVSASASVPTSTPSAPSSPTARPRAILADRPRPPPVLAVRAVR 257


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,007,754
Number of Sequences: 1657284
Number of extensions: 12643632
Number of successful extensions: 32415
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 30893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32356
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)