Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30972
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   2.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.3  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 31  TFVLLA--AILGTALAVGQYYVPRSYYTID 114
           TFVL+A  A+LG ALA  Q      Y  ID
Sbjct: 3   TFVLVAFAAVLGLALARPQEKYTTKYDNID 32


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 295 PTPLPRLLVIVRERPSP 245
           PTP PR   + R +P P
Sbjct: 251 PTPKPRPTKVSRRKPRP 267


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 390 VFCYLIYLY 364
           VFCY IYL+
Sbjct: 146 VFCYFIYLF 154


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 371 TYIFAVSVPENIQIISEFSGGHTPIA 294
           +Y+F++S+ +N Q+ +       P+A
Sbjct: 45  SYLFSLSLAQNNQLFTHHKAPIRPVA 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,847
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)