Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30966
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   5.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   5.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.4  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   9.4  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 245 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFYGHNSYIFSIVCHF 105
           I+ M FAS+L FI     NSL   K    + +FY   S+ F I+  F
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYW--SFGFLIIQRF 334


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 327 TELQNELFLCYL*EEMVSYLFHHQYVLVFKTDII 428
           +E Q  +FLCY   E      H Q  L     +I
Sbjct: 300 SESQQTVFLCYKLMEKFPERSHEQQELYMAAQVI 333


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 245 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFY 144
           I+ M FAS+L FI     NSL   K    + +FY
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 245 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFY 144
           I+ M FAS+L FI     NSL   K    + +FY
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 148 FTVITATFSVSSAISRYCYEN 86
           F  + +TFS+      YCY++
Sbjct: 237 FLFVLSTFSICITQFYYCYDS 257


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 10  PNTFNRH 30
           PNT+NRH
Sbjct: 509 PNTYNRH 515


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 18  IQPTSLKIQFKNSDYFNK 71
           + PT +KI F+N  Y  K
Sbjct: 79  LTPTQVKIWFQNHRYKTK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,902
Number of Sequences: 336
Number of extensions: 1378
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)