Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30966
         (454 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p pro...    84   1e-16
AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-P...    84   1e-16
AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p pro...    29   2.2  
AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA...    29   2.2  

>BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p
           protein.
          Length = 103

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 38/51 (74%), Positives = 47/51 (92%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 MADDTENVA--VMTVKEPLDLIRLSLDERIYVKMRNERELRGKLHAYDQHL 254
           MAD+TE ++  ++ VKEPLDLIRLSLDE++YVKMRNERELRG+LHA+DQHL
Sbjct: 1   MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHL 51



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 29/51 (56%), Positives = 32/51 (62%)
 Frame = +2

Query: 254 DMVLGDAXXXXXXXXXXXXXXXXXXRTTKRTIPMLFVRGDGVILVSPPVRV 406
           +MVLGDA                  +T KRTIPMLFVRGDGVILVSPP+RV
Sbjct: 52  NMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRV 102


>AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-PA
           protein.
          Length = 103

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 38/51 (74%), Positives = 47/51 (92%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 MADDTENVA--VMTVKEPLDLIRLSLDERIYVKMRNERELRGKLHAYDQHL 254
           MAD+TE ++  ++ VKEPLDLIRLSLDE++YVKMRNERELRG+LHA+DQHL
Sbjct: 1   MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHL 51



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 29/51 (56%), Positives = 32/51 (62%)
 Frame = +2

Query: 254 DMVLGDAXXXXXXXXXXXXXXXXXXRTTKRTIPMLFVRGDGVILVSPPVRV 406
           +MVLGDA                  +T KRTIPMLFVRGDGVILVSPP+RV
Sbjct: 52  NMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRV 102


>AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p
           protein.
          Length = 91

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 153 PLDLIRLSLDERIYVKMRNERELRGKLHAYD 245
           PL+L+   +  RI++ M+N++E+ G L  +D
Sbjct: 15  PLELVDKCIGSRIHIIMKNDKEMVGTLLGFD 45


>AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA
           protein.
          Length = 91

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 153 PLDLIRLSLDERIYVKMRNERELRGKLHAYD 245
           PL+L+   +  RI++ M+N++E+ G L  +D
Sbjct: 15  PLELVDKCIGSRIHIIMKNDKEMVGTLLGFD 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,890
Number of Sequences: 53049
Number of extensions: 223265
Number of successful extensions: 433
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)