Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30965
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    32   0.017
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.36 
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    25   3.4  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 32.3 bits (70), Expect = 0.017
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +1

Query: 178 PYPVKIKERVPYPVHVAKPYPVPVPQ 255
           PYP+++++  P+PV V K + VPVP+
Sbjct: 231 PYPIEVEK--PFPVEVLKKFEVPVPK 254



 Score = 31.5 bits (68), Expect = 0.029
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 184 PVKIKERVPYPVHVAKPYPVPVPQLLKFHIL*HRGMDITVMKH 312
           PV      PYP+ V KP+PV V +  +  +     + +TV KH
Sbjct: 223 PVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKH 265



 Score = 28.7 bits (61), Expect = 0.21
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 178 PYPVKIKERVPYPVHVAKPYPVPV 249
           P+PV++ ++  + V V KPYPVPV
Sbjct: 239 PFPVEVLKK--FEVPVPKPYPVPV 260



 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 178 PYPVKIKERVPYPVHVAKPYPVPVP 252
           P+ VK+    PYP+ V    P+ +P
Sbjct: 187 PHYVKVYIPQPYPLQVNVEQPIKIP 211


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 VPYPVHVAKPYPVPVP 252
           VPYP+ +  P P+PVP
Sbjct: 630 VPYPIIIPLPLPIPVP 645


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 573 RKSLSCSYWLCSKVLSPFPELPNC 502
           RK+L C   + SK  +  PE PNC
Sbjct: 77  RKTLVCCAGVRSKGKTSLPESPNC 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,173
Number of Sequences: 2352
Number of extensions: 19878
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)