Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30963
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58091-1|AAC50548.1| 288|Homo sapiens Hs-CUL-4B protein. 32 1.9
U58090-1|AAC50547.1| 421|Homo sapiens Hs-CUL-4A protein. 32 1.9
BX537787-1|CAD97843.1| 895|Homo sapiens hypothetical protein pr... 32 1.9
BC036216-1|AAH36216.1| 913|Homo sapiens cullin 4B protein. 32 1.9
BC008308-1|AAH08308.2| 759|Homo sapiens cullin 4A protein. 32 1.9
AY365125-1|AAR13073.1| 895|Homo sapiens cullin 4B protein. 32 1.9
AY365124-1|AAR13072.1| 759|Homo sapiens cullin 4A protein. 32 1.9
AL451005-1|CAI41370.1| 913|Homo sapiens cullin 4B protein. 32 1.9
AL136221-5|CAI13795.1| 659|Homo sapiens cullin 4A protein. 32 1.9
AL136221-4|CAM18410.1| 759|Homo sapiens cullin 4A protein. 32 1.9
AF212995-1|AAK16812.1| 782|Homo sapiens cullin CUL4B protein. 32 1.9
AF077188-1|AAD45191.1| 659|Homo sapiens cullin 4A protein. 32 1.9
AC002476-3|AAB67315.1| 652|Homo sapiens WUGSC:H_DJ318C15.2 prot... 32 1.9
AB178950-1|BAD93235.1| 759|Homo sapiens cullin-4A protein. 32 1.9
AB014595-1|BAA31670.2| 781|Homo sapiens KIAA0695 protein protein. 32 1.9
AB012193-1|BAA33146.1| 524|Homo sapiens cullin-4A protein. 32 1.9
>U58091-1|AAC50548.1| 288|Homo sapiens Hs-CUL-4B protein.
Length = 288
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 276 RDKENPNQYNYIA 288
>U58090-1|AAC50547.1| 421|Homo sapiens Hs-CUL-4A protein.
Length = 421
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 409 RDKDNPNQYHYVA 421
>BX537787-1|CAD97843.1| 895|Homo sapiens hypothetical protein
protein.
Length = 895
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 883 RDKENPNQYNYIA 895
>BC036216-1|AAH36216.1| 913|Homo sapiens cullin 4B protein.
Length = 913
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 901 RDKENPNQYNYIA 913
>BC008308-1|AAH08308.2| 759|Homo sapiens cullin 4A protein.
Length = 759
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 747 RDKDNPNQYHYVA 759
>AY365125-1|AAR13073.1| 895|Homo sapiens cullin 4B protein.
Length = 895
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 883 RDKENPNQYNYIA 895
>AY365124-1|AAR13072.1| 759|Homo sapiens cullin 4A protein.
Length = 759
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 747 RDKDNPNQYHYVA 759
>AL451005-1|CAI41370.1| 913|Homo sapiens cullin 4B protein.
Length = 913
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 901 RDKENPNQYNYIA 913
>AL136221-5|CAI13795.1| 659|Homo sapiens cullin 4A protein.
Length = 659
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 647 RDKDNPNQYHYVA 659
>AL136221-4|CAM18410.1| 759|Homo sapiens cullin 4A protein.
Length = 759
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 747 RDKDNPNQYHYVA 759
>AF212995-1|AAK16812.1| 782|Homo sapiens cullin CUL4B protein.
Length = 782
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 770 RDKENPNQYNYIA 782
>AF077188-1|AAD45191.1| 659|Homo sapiens cullin 4A protein.
Length = 659
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 647 RDKDNPNQYHYVA 659
>AC002476-3|AAB67315.1| 652|Homo sapiens WUGSC:H_DJ318C15.2
protein.
Length = 652
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 640 RDKENPNQYNYIA 652
>AB178950-1|BAD93235.1| 759|Homo sapiens cullin-4A protein.
Length = 759
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 747 RDKDNPNQYHYVA 759
>AB014595-1|BAA31670.2| 781|Homo sapiens KIAA0695 protein protein.
Length = 781
Score = 31.9 bits (69), Expect = 1.9
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDK+NPNQYNY+A
Sbjct: 769 RDKENPNQYNYIA 781
>AB012193-1|BAA33146.1| 524|Homo sapiens cullin-4A protein.
Length = 524
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 RDKDNPNQYNYVA 40
RDKDNPNQY+YVA
Sbjct: 512 RDKDNPNQYHYVA 524
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,900,676
Number of Sequences: 237096
Number of extensions: 1310548
Number of successful extensions: 3056
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3055
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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