Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30963
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p pro...    31   1.6  
AY051648-1|AAK93072.1|  601|Drosophila melanogaster GM14815p pro...    31   1.6  
AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA ...    31   1.6  
M72421-1|AAA28715.1|  401|Drosophila melanogaster nanos protein.       28   8.8  
AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p pro...    28   8.8  
AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA...    28   8.8  
AE014297-2634|AAF55641.1|  401|Drosophila melanogaster CG5637-PA...    28   8.8  

>BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p
           protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 2   RDKDNPNQYNYVA 40
           RDKDN NQYNYVA
Sbjct: 809 RDKDNQNQYNYVA 821


>AY051648-1|AAK93072.1|  601|Drosophila melanogaster GM14815p
           protein.
          Length = 601

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 2   RDKDNPNQYNYVA 40
           RDKDN NQYNYVA
Sbjct: 589 RDKDNQNQYNYVA 601


>AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA
           protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 2   RDKDNPNQYNYVA 40
           RDKDN NQYNYVA
Sbjct: 809 RDKDNQNQYNYVA 821


>M72421-1|AAA28715.1|  401|Drosophila melanogaster nanos protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 274 RNNYNS-FSPKVTNRTVVCPVCPASDD 351
           R+N+N    PK+  RT VCP+C AS D
Sbjct: 338 RDNFNRVLCPKL--RTYVCPICGASGD 362


>AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p
           protein.
          Length = 614

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 107 GH-LPPPHARHPQRALAA 157
           GH  PPPH +HPQR  AA
Sbjct: 22  GHPRPPPHPQHPQRPQAA 39


>AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA
           protein.
          Length = 614

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 107 GH-LPPPHARHPQRALAA 157
           GH  PPPH +HPQR  AA
Sbjct: 22  GHPRPPPHPQHPQRPQAA 39


>AE014297-2634|AAF55641.1|  401|Drosophila melanogaster CG5637-PA
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 274 RNNYNS-FSPKVTNRTVVCPVCPASDD 351
           R+N+N    PK+  RT VCP+C AS D
Sbjct: 338 RDNFNRVLCPKL--RTYVCPICGASGD 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,547,299
Number of Sequences: 53049
Number of extensions: 420703
Number of successful extensions: 1125
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)