Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30962
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 65  KRPMSAYMLWLNSAREQIKSEXPGLRVTEIAKKGGEIWKSM 187
           K+P++A+ML++   R ++ +E        I +  G  W ++
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 65  KRPMSAYMLWLNSAREQIKSEXPGLRVTEIAKKGGEIWKSM 187
           K+P++A+ML++   R ++ +E        I +  G  W ++
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 246 SFAYCSLALAAFCSHSVLSFIDFQISPPFLAISVT 142
           +  YCSLA+   C   +       I+ P L I V+
Sbjct: 412 ALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVS 446


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 301  EPSFRPLRHHRHWHCK 254
            +PS+RP     HW  K
Sbjct: 1171 KPSYRPPSTTNHWQTK 1186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,811
Number of Sequences: 336
Number of extensions: 2004
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)