Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30961
         (705 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26200.1 68418.m03118 mitochondrial substrate carrier family ...    34   0.11 
At3g49990.1 68416.m05466 expressed protein                             33   0.24 
At5g22810.1 68418.m02667 GDSL-motif lipase, putative similar to ...    30   1.3  
At3g01290.1 68416.m00037 band 7 family protein similar to hypers...    29   3.0  
At5g56730.1 68418.m07080 peptidase M16 family protein / insulina...    29   4.0  
At2g45800.1 68415.m05696 LIM domain-containing protein similar t...    29   4.0  
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical...    28   6.9  
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ...    27   9.2  

>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 342

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 234 TSVGLTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 118
           T++ +T+SS+  AT R+G + TTS + A G A LT+A A
Sbjct: 108 TALEITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146


>At3g49990.1 68416.m05466 expressed protein
          Length = 502

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 412 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEFQKKKNLV 534
           +P   A+  D+K E P A+P   KT  Q +  E +++KN V
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEEKKERKNAV 462


>At5g22810.1 68418.m02667 GDSL-motif lipase, putative similar to
           EXL3 (GP:15054386) [Arabidopsis thaliana]
          Length = 337

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 321 IVLFGLWYSGYLVVTNWSRFGFLSSVAAATSVGLTESSILGATSRIG 181
           +V+F ++   Y + T  S FGF  +  A    GL E+SIL     +G
Sbjct: 254 LVVFDIYQPLYDLATRPSEFGFAEARRACCGTGLLETSILCNPKSVG 300


>At3g01290.1 68416.m00037 band 7 family protein similar to
           hypersensitive-induced response protein [Zea mays]
           GI:7716470; contains Pfam profile PF01145: SPFH domain /
           Band 7 family
          Length = 285

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 232 FGRFNRVINFGRDF*NWLSGNYV 164
           FG+F +V+N G  F  W+ G+YV
Sbjct: 21  FGKFQKVLNPGLQFVPWVIGDYV 43


>At5g56730.1 68418.m07080 peptidase M16 family protein / insulinase
            family protein contains Pfam domain, PF05193: Peptidase
            M16 inactive domain
          Length = 956

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 300  YSGYLVVTNWSRFGFLSSVAAATSVG--LTESSILGATSRIG 181
            Y+  +++   SRFGFLSS+ ++ S G  + ++ IL   + +G
Sbjct: 903  YTAVILMPQRSRFGFLSSIFSSRSEGPYIRDTKILAGIAGLG 944


>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
           PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
           protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
           Pfam profile PF00412: LIM domain
          Length = 226

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 283 DEVPAIPEAKKDDIAPE 333
           D+  +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213


>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
            EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
            member of the natural resistance-associated macrophage
            protein (NRAMP) metal transporter family, PMID:11500563;
            metal transport capacity has not been shown,
            PMID:11500563, PMID:1038174
          Length = 1294

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 528  PSATDAEGSADSAAIIPNMVKKIDLASYCRK 620
            P+A  A+G   +A  + +++K +++A  CRK
Sbjct: 1209 PAAKPAKGKCTTAVTLLDLIKDVEMAISCRK 1239


>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 586

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 FLRFSLQERFPVSRYRSLLGLYRPFWPLV 299
           FL F   E  PV  ++ L  L RP WPL+
Sbjct: 25  FLSFPRPENTPVQLFQLLHTLERPGWPLL 53


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,147,047
Number of Sequences: 28952
Number of extensions: 236747
Number of successful extensions: 714
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)