Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30960
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.7  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.0  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   7.0  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 351  QLCRYLNFNIYYNTTKTFTQNENYEHFVKLFPHSF 455
            ++ +Y     Y +   T+T +E Y H +++ P  F
Sbjct: 1860 KVAKYWQVGNYEHRLTTYTYSETYGHLIEVLPPQF 1894


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 339  PCATQLCRYLNFNIYYNTTKTFTQNENY 422
            P A++   Y  FN+YY+  +T  +N  +
Sbjct: 1298 PFASETYHYHQFNLYYDAQRTSVKNVKF 1325



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 384  YNTTKTFTQNENYEHFVKLFPHSFVNKFKFYCLNRQ 491
            YN  + +  ++ Y  + K +PH F + F  Y  N +
Sbjct: 958  YNKHQEYKSSDYYYKYYKQYPHLFKDYFSQYNKNHK 993


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 YYKHDNIILQQSINLPDAIL-GSFKEASESLTR 308
           +Y H N +L+QS+ + DAI  G++ +  E + +
Sbjct: 299 FYWHANEVLEQSLGIGDAIYNGAWPDFEEPIRK 331


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 400  HLLKMKTMSIL*NCFHTLSSINLNFIALIDK 492
            H  + KT   + NCF T S+ NLN I   ++
Sbjct: 3063 HKRQTKTPFHITNCFRTNSADNLNTITCYEQ 3093


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 405 TQNENYEHFVKLFPHSFVNKFKFYCLNRQNRV 500
           T++ N   F++LFP SFV+   F  L  +  +
Sbjct: 138 TKDLNIPSFLELFPDSFVDPSVFPKLREEGAI 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,808
Number of Sequences: 2352
Number of extensions: 18300
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)