Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30958
(778 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 48 3e-04
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 46 0.001
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 43 0.007
UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin... 41 0.040
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 40 0.069
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 40 0.092
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 39 0.16
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 38 0.37
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 36 1.1
UniRef50_Q5NQ15 Cluster: MFS permease; n=1; Zymomonas mobilis|Re... 35 2.6
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 34 3.4
UniRef50_Q89P84 Cluster: Blr3599 protein; n=2; Alphaproteobacter... 34 3.4
UniRef50_UPI0000660ED7 Cluster: UPI0000660ED7 related cluster; n... 34 4.6
UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum dem... 34 4.6
UniRef50_UPI00004995FA Cluster: hypothetical protein 122.t00007;... 33 6.0
UniRef50_UPI00015A63B4 Cluster: UPI00015A63B4 related cluster; n... 33 6.0
UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whol... 33 6.0
UniRef50_A0UGS3 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_UPI000049871A Cluster: hypothetical protein 306.t00004;... 33 8.0
UniRef50_A5AVJ8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = -2
Query: 300 IIR*RKSESGTCDREVRIARLGWYRHVMRRNENEVAKRVLTMNVKG-YIGRGRPKKKWMD 124
+IR + + D+ +R ARL W+ HV RR+ + +R M V+G GRGRPKK W +
Sbjct: 603 VIREKVGVASVVDK-LREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEE 661
Query: 123 CVKDDM 106
++ D+
Sbjct: 662 VIRQDL 667
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -2
Query: 279 ESGTCDREVRIARLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCVKDDMCK 100
E DR V RL ++ H+ R N +L N+ G RGRP K+W DC+K D CK
Sbjct: 848 EETIIDR-VATKRLRYFGHINRMNSKRYPHILLNGNIHGKRPRGRPAKRWTDCIKAD-CK 905
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 258 EVRIARLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCVKDDMCK 100
+V R+ ++ HV+R K + V G RGRP K+W+DC+ +D CK
Sbjct: 941 KVSTKRIKYFGHVLRMKPTRYPKIAVEGKVTGNRPRGRPPKRWLDCISED-CK 992
>UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to neprilysin-like protein - Nasonia vitripennis
Length = 979
Score = 40.7 bits (91), Expect = 0.040
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -2
Query: 276 SGTCDREVRIARLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCVKDDMCKG 97
S +R ++ RLGW HV R ++ A V+ + GRP+ +W D VK D+ +
Sbjct: 882 SPNINRIIKSRRLGWAGHVERMGDDRTAACVMKGRPMVTLPLGRPRLRWEDNVKADLVEI 941
Query: 96 GR 91
GR
Sbjct: 942 GR 943
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 39.9 bits (89), Expect = 0.069
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = -2
Query: 243 RLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCVKD 112
+LG++ H++R + + +A +++ V+G RGR +K+W D +K+
Sbjct: 331 KLGYFGHILRGSGSPLAAQIIESQVEGKRKRGRQRKQWFDNIKE 374
>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
Papilionoideae|Rep: Reverse transcriptase family member
- Glycine max (Soybean)
Length = 377
Score = 39.5 bits (88), Expect = 0.092
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 243 RLGWYRHVMRRNENEVAKRVLTMNVKGYI-GRGRPKKKWMDCVKDDM 106
RL W+ HV RR + V +RV M + I GRGRPKK + +K D+
Sbjct: 305 RLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIREVIKKDL 351
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 264 DREVRIARLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCVKDDMCKGGRN 88
+ E+R R W H +R++ N V ++ LT N + RGRPK ++ DM + +N
Sbjct: 904 EEEIRKKRWKWIWHTLRKSPNCVTRQALTWNPERQRRRGRPKNTLRREIETDMRRMNKN 962
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 37.5 bits (83), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 297 IR*RKSESGTCDREVRIARLGWYRHVMRRNENEVAKRVLTMNVKGYIGRGRPKKKWMDCV 118
IR R + T E+ L W+ HV+R + + + + G RGRP K+W D V
Sbjct: 428 IRQRLNIPSTICEEITKRCLKWFGHVLRMPHHRLPYQAFQNDFNGRRPRGRPPKRWKDQV 487
Query: 117 KDDM 106
+ D+
Sbjct: 488 QYDV 491
>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 1096
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 216 RRNENEVAKRVL-TMNVKGYIGRGRPKKKWMDCVKDD 109
++NE++ +L NV G RGRP K+W DC+K D
Sbjct: 6 QQNESKKIPHILLNENVHGKHPRGRPAKRWTDCIKAD 42
>UniRef50_Q5NQ15 Cluster: MFS permease; n=1; Zymomonas mobilis|Rep:
MFS permease - Zymomonas mobilis
Length = 417
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 229 IPSQTRNSHFSVTRATFRLPLTYYFVFVSVFC 324
+P TR H SVT ++F + LT F+ VS+FC
Sbjct: 55 LPELTRYFHVSVTESSFAISLTTGFLAVSIFC 86
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -2
Query: 288 RKSESGTCDREVRIARLGWYRHVMRRNENEVAKRVLTMN-VKGYIGRGRPKKKWMDCVKD 112
R ++ + + ++ RL ++ H+M+ N E A T+ V G RGR + +W+D +K
Sbjct: 175 RVKQNVSLEGKITKQRLSFFGHIMQTNSMETA---FTLGAVSGSRRRGRQRTRWLDTIKT 231
Query: 111 D 109
D
Sbjct: 232 D 232
>UniRef50_Q89P84 Cluster: Blr3599 protein; n=2;
Alphaproteobacteria|Rep: Blr3599 protein -
Bradyrhizobium japonicum
Length = 449
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 62 PSLLLYHIPFLPPLHISSFTQSIHFFLGLPLPIYP 166
P L L H+P PP HI + T ++F+L P++P
Sbjct: 385 PGLTLVHLP-TPPPHIRAITDHVYFYLDRKSPLWP 418
>UniRef50_UPI0000660ED7 Cluster: UPI0000660ED7 related cluster; n=1;
Takifugu rubripes|Rep: UPI0000660ED7 UniRef100 entry -
Takifugu rubripes
Length = 126
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 60 HLPYSSIIYHFFPPYTYRLSHNPSISS*VYLFLYILSHS 176
H+P +IIYH PP T H PS +S ++ +I S++
Sbjct: 62 HIPSDTIIYHHIPPDTIIYHHIPSDTSYTIIYRHIPSYT 100
>UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum
demissum|Rep: Polyprotein, putative - Solanum demissum
(Wild potato)
Length = 115
Score = 33.9 bits (74), Expect = 4.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 258 EVRIARLGWYRHVMRRNENEVAKRVLTMNVKG-YIGRGRPKKKW 130
+ R ARL W+ HVMRR+ +R ++V G G GR K W
Sbjct: 69 KTRKARLRWFGHVMRRSTEAPVRRCERLDVVGKRRGSGRLKNYW 112
>UniRef50_UPI00004995FA Cluster: hypothetical protein 122.t00007;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 122.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 491
Score = 33.5 bits (73), Expect = 6.0
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 483 ASNRCELLFLLTHPADSANNKPESLEYAIGKLRSYYKNLPLVPRDSVFRASFISPNL 653
+SNR + FL + N + +S +Y++ S + N PL+ D ++++ +SP L
Sbjct: 325 SSNRYSMAFLKSPITSPQNLQRKSFQYSVSPSLSPHNNEPLLKSDLIYQSCSVSPYL 381
>UniRef50_UPI00015A63B4 Cluster: UPI00015A63B4 related cluster; n=3;
Danio rerio|Rep: UPI00015A63B4 UniRef100 entry - Danio
rerio
Length = 451
Score = 33.5 bits (73), Expect = 6.0
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 60 HLPYSSIIYHFFPPYTYRLSHNPSI-SS*VYLFLYILSHS*LTLA*QPHFHFVSSHVYTI 236
HL +S I H TY L +P + SS ++++ + S S L PH H H+YT
Sbjct: 287 HL-HSYIHIHTHETSTYTLIRHPHLHSSDIHIYTHRTSTS--ILIRHPHLHSSELHIYTY 343
Query: 237 PNAQFSLLCHTCHFQTSSNVLFR 305
++ + H QTS++ L R
Sbjct: 344 HSSDIHIYTH----QTSTSTLIR 362
>UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14527,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 52
Score = 33.5 bits (73), Expect = 6.0
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 219 MRRNENEV-AKRVLTMNVKGYIGRGRPKKKWMDCVKDDM 106
M R E E +R+L + + G RGR K+++MD VK+DM
Sbjct: 1 MSRGEMEKDGRRMLRLELPGRRPRGRTKRRFMDVVKEDM 39
>UniRef50_A0UGS3 Cluster: Putative uncharacterized protein
precursor; n=3; Burkholderia|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 669
Score = 33.5 bits (73), Expect = 6.0
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 624 RRCHGVQVASFYNMSGASRSRIRATRV-YCSRCRRGALT 511
R C G++ AS A RSR+RA R CSR RRG T
Sbjct: 513 RACGGLRPASARGRRAARRSRVRARRACRCSRGRRGRAT 551
>UniRef50_UPI000049871A Cluster: hypothetical protein 306.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 509
Score = 33.1 bits (72), Expect = 8.0
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 78 IIYHFFPPYTYRLSHNPSISS*VYLFLYILSHS*LTLA*QPHFHFVSSHVYTIPNAQFSL 257
I H YT +S PS S +Y LY L + L QP+ +S + +IPN F
Sbjct: 275 IASHIISHYTLIVSDVPSSSQYIYDLLYPLDQA--NLYNQPNTQPLSQKIISIPNPFFRT 332
Query: 258 LCHT 269
+C T
Sbjct: 333 ICLT 336
>UniRef50_A5AVJ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 188
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 495 CELLFLLTHPADSANNKPESLEYAIGKLRSYYKNL 599
CE+ FLL S N P SL Y + K+ + YK L
Sbjct: 54 CEIYFLLLQKVVSKNKLPRSLFYIVKKITTIYKRL 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,920,546
Number of Sequences: 1657284
Number of extensions: 13759360
Number of successful extensions: 32358
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 31336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32347
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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