Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30957
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   198   7e-51
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   198   7e-51
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   198   7e-51
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   198   7e-51
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   198   7e-51
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...   169   5e-42
AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC...   142   5e-34
AY058684-1|AAL13913.1|  857|Drosophila melanogaster LD40216p pro...    29   5.3  
AF203478-1|AAF18985.1|  857|Drosophila melanogaster Dalmatian pr...    29   5.3  
AE014297-1011|AAF54430.1|  857|Drosophila melanogaster CG8374-PA...    29   5.3  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  198 bits (483), Expect = 7e-51
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSI 435
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY             W D+LG+KSI
Sbjct: 98  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSI 157

Query: 436 EKDFKKMIRYCSVVRVIAHTQMKL*NSDKRRLTLWKSNLTVVPSRTK*NGPENIWEKPIP 615
           E DF+KM+RYC V+RVIAH+Q++L    +++  + +  L       K        EKPI 
Sbjct: 158 ENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ 217

Query: 616 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 762
           V +VF QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 218 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 266



 Score =  169 bits (410), Expect = 5e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
           SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 13  SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 72

Query: 182 RPGSKINKKEIVEAVTIIETPPMVL 256
           RPGSKINKKE+VEAVT++ETPPM++
Sbjct: 73  RPGSKINKKEVVEAVTVLETPPMIV 97


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  198 bits (483), Expect = 7e-51
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSI 435
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY             W D+LG+KSI
Sbjct: 87  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSI 146

Query: 436 EKDFKKMIRYCSVVRVIAHTQMKL*NSDKRRLTLWKSNLTVVPSRTK*NGPENIWEKPIP 615
           E DF+KM+RYC V+RVIAH+Q++L    +++  + +  L       K        EKPI 
Sbjct: 147 ENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ 206

Query: 616 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 762
           V +VF QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255



 Score =  169 bits (410), Expect = 5e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
           SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2   SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61

Query: 182 RPGSKINKKEIVEAVTIIETPPMVL 256
           RPGSKINKKE+VEAVT++ETPPM++
Sbjct: 62  RPGSKINKKEVVEAVTVLETPPMIV 86


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  198 bits (483), Expect = 7e-51
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSI 435
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY             W D+LG+KSI
Sbjct: 74  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSI 133

Query: 436 EKDFKKMIRYCSVVRVIAHTQMKL*NSDKRRLTLWKSNLTVVPSRTK*NGPENIWEKPIP 615
           E DF+KM+RYC V+RVIAH+Q++L    +++  + +  L       K        EKPI 
Sbjct: 134 ENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ 193

Query: 616 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 762
           V +VF QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 242



 Score =  142 bits (344), Expect = 5e-34
 Identities = 62/73 (84%), Positives = 68/73 (93%)
 Frame = +2

Query: 38  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 218 EAVTIIETPPMVL 256
           EAVT++ETPPM++
Sbjct: 61  EAVTVLETPPMIV 73


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  198 bits (483), Expect = 7e-51
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSI 435
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY             W D+LG+KSI
Sbjct: 74  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSI 133

Query: 436 EKDFKKMIRYCSVVRVIAHTQMKL*NSDKRRLTLWKSNLTVVPSRTK*NGPENIWEKPIP 615
           E DF+KM+RYC V+RVIAH+Q++L    +++  + +  L       K        EKPI 
Sbjct: 134 ENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ 193

Query: 616 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 762
           V +VF QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 242



 Score =  142 bits (344), Expect = 5e-34
 Identities = 62/73 (84%), Positives = 68/73 (93%)
 Frame = +2

Query: 38  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 218 EAVTIIETPPMVL 256
           EAVT++ETPPM++
Sbjct: 61  EAVTVLETPPMIV 73


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  198 bits (483), Expect = 7e-51
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSI 435
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY             W D+LG+KSI
Sbjct: 87  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSI 146

Query: 436 EKDFKKMIRYCSVVRVIAHTQMKL*NSDKRRLTLWKSNLTVVPSRTK*NGPENIWEKPIP 615
           E DF+KM+RYC V+RVIAH+Q++L    +++  + +  L       K        EKPI 
Sbjct: 147 ENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ 206

Query: 616 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 762
           V +VF QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255



 Score =  169 bits (410), Expect = 5e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
           SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2   SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61

Query: 182 RPGSKINKKEIVEAVTIIETPPMVL 256
           RPGSKINKKE+VEAVT++ETPPM++
Sbjct: 62  RPGSKINKKEVVEAVTVLETPPMIV 86


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
           isoform D protein.
          Length = 161

 Score =  169 bits (410), Expect = 5e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
           SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2   SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61

Query: 182 RPGSKINKKEIVEAVTIIETPPMVL 256
           RPGSKINKKE+VEAVT++ETPPM++
Sbjct: 62  RPGSKINKKEVVEAVTVLETPPMIV 86



 Score = 76.2 bits (179), Expect = 5e-14
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 366
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 87  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123


>AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC,
           isoform C protein.
          Length = 125

 Score =  142 bits (344), Expect = 5e-34
 Identities = 62/73 (84%), Positives = 68/73 (93%)
 Frame = +2

Query: 38  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 218 EAVTIIETPPMVL 256
           EAVT++ETPPM++
Sbjct: 61  EAVTVLETPPMIV 73



 Score = 68.9 bits (161), Expect = 7e-12
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +1

Query: 256 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 360
           VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 74  VGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108


>AY058684-1|AAL13913.1|  857|Drosophila melanogaster LD40216p
           protein.
          Length = 857

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -3

Query: 361 SFCRSDVDSLQTYAP--PRQSKERVVHEGSQCIQQHRQNHRRSLDDGD 224
           S+    V     Y P  P +  E + HE S C   H QNH  + +D +
Sbjct: 441 SYSSDHVQRRHVYVPDSPVEHAENIPHEESICPPLHEQNHDSNANDSN 488


>AF203478-1|AAF18985.1|  857|Drosophila melanogaster Dalmatian
           protein.
          Length = 857

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -3

Query: 361 SFCRSDVDSLQTYAP--PRQSKERVVHEGSQCIQQHRQNHRRSLDDGD 224
           S+    V     Y P  P +  E + HE S C   H QNH  + +D +
Sbjct: 441 SYSSDHVQRRHVYVPDSPVEHAENIPHEESICPPLHEQNHDSNANDSN 488


>AE014297-1011|AAF54430.1|  857|Drosophila melanogaster CG8374-PA
           protein.
          Length = 857

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -3

Query: 361 SFCRSDVDSLQTYAP--PRQSKERVVHEGSQCIQQHRQNHRRSLDDGD 224
           S+    V     Y P  P +  E + HE S C   H QNH  + +D +
Sbjct: 441 SYSSDHVQRRHVYVPDSPVEHAENIPHEESICPPLHEQNHDSNANDSN 488


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,687,298
Number of Sequences: 53049
Number of extensions: 795477
Number of successful extensions: 1865
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)