Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30955
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   1.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   4.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   4.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   9.7  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 305 GSKVPIRDKACSWAARPWQGLIGHNDVLAKLSPLREKIKQLADAGSKSQPEWFTKVLGL 481
           G+       A + A +P    I H+D  AKL+ +R+   Q  +   ++  E+ T V+ L
Sbjct: 122 GAGAAASGSAAAQAGQP-DNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNL 179


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 435 PVPKANPSGSPKF*GYQTKSTTWPTYSDQS 524
           P P + PS  P     Q  ST+ PTYS +S
Sbjct: 75  PSPSSTPSSLPT----QRTSTSNPTYSSRS 100


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 412 LPQRAKFSQNVVMSDQSLPRSSCPR 338
           + + A FS  V+ SD+ L    CP+
Sbjct: 15  IEEPATFSDAVLSSDEELFHQKCPK 39


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 212 YDFGEGDLSVVVSQTLQCAHVAAEFVGIVA 123
           Y +G G  +V       C H+   FVG+ A
Sbjct: 36  YRWGNGRFTVDHIDPYLCTHIIYSFVGLQA 65


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 326 PLSAL*NRPRRD-TCIHQ 276
           PL A+ N+PR+D  C+ Q
Sbjct: 455 PLDAICNKPRKDAVCVSQ 472


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 383 VLAKLSPLREKIKQLADAGSK 445
           V+  +SP RE   Q+AD G K
Sbjct: 237 VVVIMSPTRELAIQIADQGKK 257


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 33  VGKWSPDPKTN 65
           V +W  DPKTN
Sbjct: 184 VARWMQDPKTN 194


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 165 KCLAHNNGQVAFTKVIFTRKFFG 233
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 165 KCLAHNNGQVAFTKVIFTRKFFG 233
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 165 KCLAHNNGQVAFTKVIFTRKFFG 233
           K L  +N Q +F KV+   + FG
Sbjct: 26  KSLGKHNLQKSFAKVVILAQIFG 48


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 103 IEHSLLYWAFQAEFVFGSG 47
           I   +L+W    +FV GSG
Sbjct: 72  ITQPVLFWIHGGDFVTGSG 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,544
Number of Sequences: 336
Number of extensions: 5236
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)