Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30955
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 127 2e-31
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 127 2e-31
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 127 2e-31
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 4.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 8.6
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 8.6
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 127 bits (306), Expect = 2e-31
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +3
Query: 3 LSTFFTKSCIVGKWSPDPKTNSAWKAQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHN 182
LS+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 188 LSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHN 247
Query: 183 NGQVAFTKVIFTRKFFGLPVGTTPLV 260
G++A+TKVI+ ++FFGLPVG T +
Sbjct: 248 GGEIAWTKVIYVKRFFGLPVGVTAAI 273
Score = 125 bits (301), Expect = 6e-31
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = +2
Query: 260 PSNENPDEYRYLCVDGSKVPI--RDKACSWAARPWQGLIGHNDVLAKLSPLREKIKQLAD 433
P++ENP +YRY C DGSKVPI K C+WAARPWQG + +N V + +++++ L
Sbjct: 274 PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGK 332
Query: 434 AGSKSQPEWFTKVLGLSDKIHYVA--DIFRSKRLTI*TRANYTEVIERGHGAPELVVRLC 607
G + + +W+ ++ L++K V + L A Y +VIER GA + ++R C
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLK---NAKYLDVIERNSGATDKIIRWC 389
Query: 608 VTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLK 724
S L KC+A++ A+SRD+RP DC E S+ DCLK
Sbjct: 390 TWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 135 DEFSGYVGALKCLAHNNGQVAF 200
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 127 bits (306), Expect = 2e-31
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +3
Query: 3 LSTFFTKSCIVGKWSPDPKTNSAWKAQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHN 182
LS+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 188 LSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHN 247
Query: 183 NGQVAFTKVIFTRKFFGLPVGTTPLV 260
G++A+TKVI+ ++FFGLPVG T +
Sbjct: 248 GGEIAWTKVIYVKRFFGLPVGVTAAI 273
Score = 125 bits (301), Expect = 6e-31
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = +2
Query: 260 PSNENPDEYRYLCVDGSKVPI--RDKACSWAARPWQGLIGHNDVLAKLSPLREKIKQLAD 433
P++ENP +YRY C DGSKVPI K C+WAARPWQG + +N V + +++++ L
Sbjct: 274 PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGK 332
Query: 434 AGSKSQPEWFTKVLGLSDKIHYVA--DIFRSKRLTI*TRANYTEVIERGHGAPELVVRLC 607
G + + +W+ ++ L++K V + L A Y +VIER GA + ++R C
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLK---NAKYLDVIERNSGATDKIIRWC 389
Query: 608 VTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLK 724
S L KC+A++ A+SRD+RP DC E S+ DCLK
Sbjct: 390 TWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 135 DEFSGYVGALKCLAHNNGQVAF 200
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 127 bits (306), Expect = 2e-31
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +3
Query: 3 LSTFFTKSCIVGKWSPDPKTNSAWKAQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHN 182
LS+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 188 LSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHN 247
Query: 183 NGQVAFTKVIFTRKFFGLPVGTTPLV 260
G++A+TKVI+ ++FFGLPVG T +
Sbjct: 248 GGEIAWTKVIYVKRFFGLPVGVTAAI 273
Score = 125 bits (301), Expect = 6e-31
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = +2
Query: 260 PSNENPDEYRYLCVDGSKVPI--RDKACSWAARPWQGLIGHNDVLAKLSPLREKIKQLAD 433
P++ENP +YRY C DGSKVPI K C+WAARPWQG + +N V + +++++ L
Sbjct: 274 PTSENPADYRYFCPDGSKVPIDANTKPCTWAARPWQGYMTNNGV-NNVEAVQKELTDLGK 332
Query: 434 AGSKSQPEWFTKVLGLSDKIHYVA--DIFRSKRLTI*TRANYTEVIERGHGAPELVVRLC 607
G + + +W+ ++ L++K V + L A Y +VIER GA + ++R C
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLK---NAKYLDVIERNSGATDKIIRWC 389
Query: 608 VTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLK 724
S L KC+A++ A+SRD+RP DC E S+ DCLK
Sbjct: 390 TWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 135 DEFSGYVGALKCLAHNNGQVAF 200
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 176 SQQRTSRLHQSHIHQ-EILRI 235
S QR + LH+ H+H ++LRI
Sbjct: 87 SWQRLTSLHELHVHGCKVLRI 107
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 6.5
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 572 GHGAPELVVRLCVTSNVALAKCRAMSVFAFSRDIRPILDCVQEASETDCLKKR---SRQW 742
G+G +L+++ ++ C+A S+ +RDI ++ Q T+ ++R QW
Sbjct: 454 GNGT-KLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQEQPTPTTESEERRFFSFHQW 512
Query: 743 LRFWHSVDDLRVTLQQPRKYVFAPGSSTRVYGEKKTP 853
+ R + R PG+ V G K P
Sbjct: 513 GILVYEPSACR-PRHEIRSTDVIPGTQEHVCGVKGIP 548
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 452 VGFWNRHQP 426
+G WN HQP
Sbjct: 328 IGCWNEHQP 336
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 452 VGFWNRHQP 426
+G WN HQP
Sbjct: 328 IGCWNEHQP 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,599
Number of Sequences: 438
Number of extensions: 6157
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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