Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30954
(502 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VHX9 Cluster: CG2791-PA; n=3; Sophophora|Rep: CG2791-... 35 1.2
UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia MC0... 34 1.6
UniRef50_A4YDW0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q6A6L3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_O68884 Cluster: Brefeldin A esterase; n=2; Bacillus sub... 33 4.8
UniRef50_A6Q7S2 Cluster: Malate dehydrogenase, NAD-dependent; n=... 33 4.8
UniRef50_A5GM04 Cluster: Uncharacterized conserved membrane prot... 33 4.8
UniRef50_Q9Y028 Cluster: Gag-related protein; n=1; Trypanosoma c... 33 4.8
UniRef50_Q54C12 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q4SPF3 Cluster: Chromosome 16 SCAF14537, whole genome s... 32 6.3
UniRef50_Q582S2 Cluster: UDP-glucose:glycoprotein glucosyltransf... 32 6.3
>UniRef50_Q9VHX9 Cluster: CG2791-PA; n=3; Sophophora|Rep: CG2791-PA
- Drosophila melanogaster (Fruit fly)
Length = 565
Score = 34.7 bits (76), Expect = 1.2
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 42 LVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTA 221
+ +LR AS HG ++ A + L+ +R K G+ GY ++NP+ +N T
Sbjct: 457 ITSLRKTASYMHGNLNLYQA-------DPLVAFSRIKSGNPGYFVIFNPTELPQASNFTI 509
Query: 222 VPSVPGTITI 251
++P +T+
Sbjct: 510 PDNLPDKMTV 519
>UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia
MC0-3|Rep: LigA - Burkholderia cenocepacia MC0-3
Length = 664
Score = 34.3 bits (75), Expect = 1.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 105 RARPPRGAHRATATRRCGGSPDLKER 28
RAR PR AHR RRCGG+ ++R
Sbjct: 55 RARAPRSAHRTERLRRCGGAARRRDR 80
>UniRef50_A4YDW0 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 288
Score = 33.1 bits (72), Expect = 3.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 153 EGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQTSRQPSNLSPTIRRTISRQRTCWSLL 332
+G GY + Y+P Q + P+ P + T Q ++ PS+++ T + S++ CWS
Sbjct: 187 QGQPGYPSPYSPQGQPPMSRPPQPPTQPTSSTGQIAQPPSSINQTSQPQTSQK--CWSCG 244
Query: 333 SP 338
P
Sbjct: 245 EP 246
>UniRef50_Q6A6L3 Cluster: Putative uncharacterized protein; n=1;
Propionibacterium acnes|Rep: Putative uncharacterized
protein - Propionibacterium acnes
Length = 329
Score = 32.7 bits (71), Expect = 4.8
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = -3
Query: 266 LARRLNCNRPGHGGYSSEIRVEILPGRVVHCHVTGVTLFPSCTNDEYVLAGVTCGRGRHV 87
+ R LN R H G S+ RV +L R VH TL + VLA +
Sbjct: 213 IGRDLNARREAHTGDLSQRRVRLLRRRGVHAGAHATTLRRALEGRRLVLADLVSAALADQ 272
Query: 86 VLTVRQRRVAAEV 48
+L R R V+ V
Sbjct: 273 LLDCRHRLVSLSV 285
>UniRef50_O68884 Cluster: Brefeldin A esterase; n=2; Bacillus
subtilis|Rep: Brefeldin A esterase - Bacillus subtilis
Length = 372
Score = 32.7 bits (71), Expect = 4.8
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 60 DASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTAVPSVPG 239
+A + G VAAAP +AS+++ V A H G+ AVY+ DL + V +
Sbjct: 35 EALATFGLDEVAAAPPVSASDDLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETSTE 94
Query: 240 TI 245
TI
Sbjct: 95 TI 96
>UniRef50_A6Q7S2 Cluster: Malate dehydrogenase, NAD-dependent; n=1;
Sulfurovum sp. NBC37-1|Rep: Malate dehydrogenase,
NAD-dependent - Sulfurovum sp. (strain NBC37-1)
Length = 320
Score = 32.7 bits (71), Expect = 4.8
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 131 HRLCKMERGSHRLHGS-VQPVPAGSPRESHCCTLRARDDYNSNVSPAVKLVTNYTKNYQP 307
H + K +G + GS V + AG+PR +RDD + VK + K Y P
Sbjct: 59 HTIVKAAKGPEDMEGSDVVIITAGAPRTPGM----SRDDLLFKNADIVKCYSREIKEYAP 114
Query: 308 AEDVLVPAKSTVVVSYVPIK 367
V+V + V++YV +K
Sbjct: 115 DAIVIVVSNPLDVMTYVALK 134
>UniRef50_A5GM04 Cluster: Uncharacterized conserved membrane
protein; n=11; Synechococcus|Rep: Uncharacterized
conserved membrane protein - Synechococcus sp. (strain
WH7803)
Length = 159
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 337 GLSRDQHVLCRLIVLRIVGDKFDGWRDV*IVIVP-GTEGTAVRFA 206
GL VLC L ++V ++ DGW++ + ++P GT T++ FA
Sbjct: 48 GLGLAIGVLCGLTFAKLVQNRLDGWKNDRLAMLPLGTAETSISFA 92
>UniRef50_Q9Y028 Cluster: Gag-related protein; n=1; Trypanosoma
cruzi|Rep: Gag-related protein - Trypanosoma cruzi
Length = 324
Score = 32.7 bits (71), Expect = 4.8
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 225 PSVPGTITIQTSRQPSNLSPTIRRTISRQR 314
P+ PGT T+ S + ++SP RRT++R+R
Sbjct: 145 PTAPGTDTVPPSAREEDVSPVRRRTLTRRR 174
>UniRef50_Q54C12 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 914
Score = 32.7 bits (71), Expect = 4.8
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +3
Query: 75 HGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQ 254
H V ++ EN +IV E H + + Q + +LT++P +P TITI
Sbjct: 538 HSRRIVRMVAEQSQDENAVIVSEVPNENHYFPGILTDSYMQAYYNSLTSIPPIPKTITIS 597
Query: 255 TSRQPSNLSP 284
T PS P
Sbjct: 598 T-LNPSGTGP 606
>UniRef50_Q4SPF3 Cluster: Chromosome 16 SCAF14537, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 16
SCAF14537, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2227
Score = 32.3 bits (70), Expect = 6.3
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +2
Query: 206 RESHCCTLRARDDYNSNVSPAVKLVTNYTKNYQPAEDVLVPAKSTVVVSYVPIKHEKREK 385
RES L ++ +V VKLV+ Y + + ++ +P + YVP++H
Sbjct: 560 RESRFSPLFKQESNKISVDDLVKLVSEYRRAEKTSKLQTIPGTLDIAFDYVPMEHPSASD 619
Query: 386 DE*IVSVKQFVCILQ*FCFYTI 451
+ SV +C L F+T+
Sbjct: 620 ---LHSVCARLCCLPVMVFHTV 638
>UniRef50_Q582S2 Cluster: UDP-glucose:glycoprotein
glucosyltransferase, putative; n=1; Trypanosoma
brucei|Rep: UDP-glucose:glycoprotein
glucosyltransferase, putative - Trypanosoma brucei
Length = 1675
Score = 32.3 bits (70), Expect = 6.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 87 HVAAAPARNASENVLIVCARWKEGHTGYMA---VYNPSRQDLHANLTAVPSVP 236
H A +N + V + W++ H G A V +PSR+ LHA L + + P
Sbjct: 341 HFEDAVGKNIEQGVKVDLHSWEKAHIGIAAAQYVMDPSREPLHALLDVLTNFP 393
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,409,960
Number of Sequences: 1657284
Number of extensions: 10910858
Number of successful extensions: 35661
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35647
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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