Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30954
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.88 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.6  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   4.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 176  SVQPVPAGSPRESHCCTLRARDDYNSNVSPAVKLVTNYTKNYQ 304
            + + VP   P ++ C TL A+    S VSP +       K Y+
Sbjct: 1095 TAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYK 1137


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 111 NASENVLIVCARWKEGHTGYMAVYN 185
           NA+E+ L +  R+ EGH   + VY+
Sbjct: 36  NATEHKLPISMRFNEGHQLSIIVYS 60


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 111 NASENVLIVCARWKEGHTGYMAVYN 185
           NA+E+ L +  R+ EGH   + VY+
Sbjct: 36  NATEHKLPISMRFNEGHQLSIIVYS 60


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 105 RARPPRGAHRATATRRCGGSPDLKERCRFRQLKV 4
           R RPPR  H    TRR   S  +  R + + +K+
Sbjct: 255 RDRPPRHFHEEHDTRR-ASSRGIIPRAKIKTVKM 287


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 501 CFNFYFRKQLY--M**RLNIV*KQNHCKMQTNCFTLTI 394
           C+  Y+ +Q Y     R  +   +N+C+   NCF  T+
Sbjct: 116 CYAVYYWRQQYEDFWHRYTLSFIENYCQFLYNCFHSTL 153


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 213 LTAVPSVPGTITIQTSRQPSNLSP 284
           +TA+P + G +T   S  P N  P
Sbjct: 71  MTALPHLSGDMTHGASISPQNTPP 94


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 213 LTAVPSVPGTITIQTSRQPSNLSP 284
           +TA+P + G +T   S  P N  P
Sbjct: 71  MTALPHLSGDMTHGASISPQNTPP 94


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 107  CGRGRHVVLT 78
            CG GRH +LT
Sbjct: 1749 CGEGRHPLLT 1758


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 152 RGSHRLHGSVQPVPAGS 202
           R  HR HG++Q  P  S
Sbjct: 344 RMPHRCHGNLQSCPTRS 360


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 21  NDTSLLDLVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGH 161
           N    L +++  ++  L HG  +VA   + N    VLI    W  G+
Sbjct: 64  NSDGTLKILDSWNEIDL-HGLENVANLKSVNPDLKVLISIGGWNAGN 109


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 209 ESHCCTLRARDDYNSN 256
           E  CC   AR DY+ N
Sbjct: 794 EKQCCKNCARVDYSMN 809


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 211 ISLLYPPCPGRLQFKRLASRQTCH 282
           IS  +PP P   Q   L+  Q C+
Sbjct: 531 ISFTFPPSPPLSQIHDLSPDQFCN 554


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 241 VPGTEGTAVRFAWRSCR 191
           V G +  ++RF+W+S R
Sbjct: 38  VRGPDFRSLRFSWKSAR 54


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 241 VPGTEGTAVRFAWRSCR 191
           V G +  ++RF+W+S R
Sbjct: 38  VRGPDFRSLRFSWKSAR 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,474
Number of Sequences: 336
Number of extensions: 2637
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)