Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30954
(502 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071357-1|AAL48979.1| 565|Drosophila melanogaster RE39378p pro... 35 0.071
AE014297-677|AAF54170.1| 565|Drosophila melanogaster CG2791-PA ... 35 0.071
AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short stop/K... 29 4.7
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 29 4.7
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 29 4.7
BT025853-1|ABF85753.1| 1471|Drosophila melanogaster IP15211p pro... 28 6.2
AE014297-2334|AAF55404.2| 407|Drosophila melanogaster CG4135-PA... 28 6.2
AE013599-3045|AAF57444.1| 1469|Drosophila melanogaster CG16742-P... 28 6.2
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 28 8.2
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,... 28 8.2
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,... 28 8.2
>AY071357-1|AAL48979.1| 565|Drosophila melanogaster RE39378p
protein.
Length = 565
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 42 LVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTA 221
+ +LR AS HG ++ A + L+ +R K G+ GY ++NP+ +N T
Sbjct: 457 ITSLRKTASYMHGNLNLYQA-------DPLVAFSRIKSGNPGYFVIFNPTELPQASNFTI 509
Query: 222 VPSVPGTITI 251
++P +T+
Sbjct: 510 PDNLPDKMTV 519
>AE014297-677|AAF54170.1| 565|Drosophila melanogaster CG2791-PA
protein.
Length = 565
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 42 LVNLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTA 221
+ +LR AS HG ++ A + L+ +R K G+ GY ++NP+ +N T
Sbjct: 457 ITSLRKTASYMHGNLNLYQA-------DPLVAFSRIKSGNPGYFVIFNPTELPQASNFTI 509
Query: 222 VPSVPGTITI 251
++P +T+
Sbjct: 510 PDNLPDKMTV 519
>AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short
stop/Kakapo isoform C protein.
Length = 638
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 197 GSPRESHCCTLRARDDYNSNVSPAVKLVTNYTK---NYQPAEDVLVPAK 334
GS ES + RA + + + V+ VT ++ N QPAED+L PAK
Sbjct: 136 GSSVESTKTSQRAPNGHRRVTTHIVRKVTTLSRAEENAQPAEDLLPPAK 184
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 197 GSPRESHCCTLRARDDYNSNVSPAVKLVTNYTK---NYQPAEDVLVPAK 334
GS ES + RA + + + V+ VT ++ N QPAED+L PAK
Sbjct: 136 GSSVESTKTSQRAPNGHRRVTTHIVRKVTTLSRAEENAQPAEDLLPPAK 184
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 197 GSPRESHCCTLRARDDYNSNVSPAVKLVTNYTK---NYQPAEDVLVPAK 334
GS ES + RA + + + V+ VT ++ N QPAED+L PAK
Sbjct: 136 GSSVESTKTSQRAPNGHRRVTTHIVRKVTTLSRAEENAQPAEDLLPPAK 184
>BT025853-1|ABF85753.1| 1471|Drosophila melanogaster IP15211p
protein.
Length = 1471
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 239 DDYNSNVSPAVKLVTNYTKNYQPAEDVLVPAK 334
DDY SNV P + +V + T + + D L P K
Sbjct: 848 DDYQSNVDPIISMVADVTN--KTSVDTLTPRK 877
>AE014297-2334|AAF55404.2| 407|Drosophila melanogaster CG4135-PA
protein.
Length = 407
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1
Query: 139 QTMSTFSLALRAGAAATWCSP 77
QT+STFS +LRA AAA P
Sbjct: 3 QTLSTFSTSLRAAAAAVAAQP 23
>AE013599-3045|AAF57444.1| 1469|Drosophila melanogaster CG16742-PA,
isoform A protein.
Length = 1469
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 239 DDYNSNVSPAVKLVTNYTKNYQPAEDVLVPAK 334
DDY SNV P + +V + T + + D L P K
Sbjct: 848 DDYQSNVDPIISMVADVTN--KTSVDTLTPRK 877
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 61 TRRCRTVSTTWRPRPHVTPARTYSSFVQDGKRVTPVTWQCTTRPGRI 201
+RR R++S+ R P Y VQD KR + V +T+P +
Sbjct: 807 SRRSRSISSELRYSPAERHPERYHDIVQDKKRPSKVREAHSTKPAPV 853
>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
isoform A protein.
Length = 1062
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 61 TRRCRTVSTTWRPRPHVTPARTYSSFVQDGKRVTPVTWQCTTRPGRI 201
+RR R++S+ R P Y VQD KR + V +T+P +
Sbjct: 807 SRRSRSISSELRYSPAERHPERYHDIVQDKKRPSKVREAHSTKPAPV 853
>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
isoform C protein.
Length = 1107
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 61 TRRCRTVSTTWRPRPHVTPARTYSSFVQDGKRVTPVTWQCTTRPGRI 201
+RR R++S+ R P Y VQD KR + V +T+P +
Sbjct: 807 SRRSRSISSELRYSPAERHPERYHDIVQDKKRPSKVREAHSTKPAPV 853
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,367,877
Number of Sequences: 53049
Number of extensions: 525682
Number of successful extensions: 1463
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -