Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30951
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   7.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 457 SSNIPCTTCSCSIG 416
           SS+ PCTTC C  G
Sbjct: 688 SSDNPCTTCFCENG 701


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
 Frame = -3

Query: 841 HQTKVKAPKNH---VPILHISSKGPYSTHYGMNSF 746
           H  ++  P  H    P++     GPY+  YG+  F
Sbjct: 262 HTFQLADPAQHDLGAPVIDAGMSGPYTKGYGVMGF 296


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 102 NDETKCPFIQQNSIISEAP 158
           ND TKC  +   + IS+AP
Sbjct: 195 NDGTKCLVVTDEASISDAP 213


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 23  EKLWCDPDEAVR 58
           EKLWCD  E V+
Sbjct: 463 EKLWCDYPEVVK 474


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 246  DYSIAFLERCLVWLLMEYI 302
            DY+ AF    +VWL + YI
Sbjct: 980  DYTSAFSSEKIVWLHLVYI 998


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 415 ILWNRSRWYKEYCWKLPDD 471
           ILW  +   KEY   LP D
Sbjct: 421 ILWTSTLTQKEYLENLPSD 439


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 587 SGSIFANVDKVASLATKQELNINAAGSYAVLQFLLQASQSSGSFQQY 447
           S   F  V K+ SLA + +  ++       + FLL  S S+  F  Y
Sbjct: 172 SDEFFYLVSKIESLACELKNTVDDFNDIFGISFLLIISYSTLHFVNY 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,189
Number of Sequences: 336
Number of extensions: 5175
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)