BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30951 (879 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 50 2e-06 01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 49 6e-06 01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 48 1e-05 01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 48 1e-05 11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 47 2e-05 01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 43 4e-04 03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 33 0.23 10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 30 2.1 02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 4.9 05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 29 6.5 >10_08_0921 + 21586034-21586229,21586464-21586576,21586768-21586875, 21586967-21587205,21587301-21587399,21587448-21587535, 21587617-21587750,21588274-21588362,21588718-21588751, 21588830-21588898,21589216-21589339 Length = 430 Score = 50.0 bits (114), Expect = 2e-06 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = +2 Query: 209 ELFPRPDQR*KKGLLHRVFRK-VSRLAADGVYPKALEGPENRRVTVWCANDYLGTSRHPT 385 E FP P + + R+ R + + A+G E + ++ ++ NDY+G S HP Sbjct: 37 ETFPCPGPWDRAAVEIRLDRATLHQWLAEGGEGSGQEEKVDEKLILFSGNDYMGLSSHPA 96 Query: 386 VQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLEGEIAKLHK 508 ++ AAV A + YG G G+ I G + + +E +A+L K Sbjct: 97 IRHAAVKAAEEYGMGPRGSALICGYTTYHKMVEESLAELKK 137 Score = 31.1 bits (67), Expect = 1.2 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +1 Query: 595 VYSDAGNHASMIQGI----RNSRAPKHIFRHNDPNHYGSLL 705 ++SDA NHAS+I GI R +++H D +H LL Sbjct: 179 IFSDALNHASIIDGIRLVERQQEVVSFVYKHCDMSHLELLL 219 >01_06_0628 + 30707353-30707548,30707846-30707958,30708090-30708197, 30708305-30708543,30708774-30708861,30708942-30709075, 30709285-30709498,30709671-30709759,30710194-30710262, 30710560-30710683 Length = 457 Score = 48.8 bits (111), Expect = 6e-06 Identities = 24/74 (32%), Positives = 40/74 (54%) Frame = +2 Query: 287 ADGVYPKALEGPENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQ 466 A+G E + ++ ++ NDY+G S HP ++ AAV A + YG G G+ I G + Sbjct: 64 AEGGEATGQEEEVDEKLILFSGNDYMGLSSHPAIRKAAVKAAQEYGMGPRGSALICGYTT 123 Query: 467 MTEKLEGEIAKLHK 508 + +E +A+L K Sbjct: 124 YHKLVEESLAELKK 137 Score = 31.5 bits (68), Expect = 0.92 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +1 Query: 595 VYSDAGNHASMIQGI----RNSRAPKHIFRHNDPNHYGSLL 705 V+SDA NHAS+I GI R +++H D +H LL Sbjct: 179 VFSDALNHASIIDGIRLVERQQEVVAFVYKHCDMHHLDFLL 219 >01_07_0051 - 40759529-40759624,40759728-40759835,40759972-40760138, 40760670-40760796,40760885-40761046,40761235-40761398, 40761561-40761654,40761736-40761860,40762304-40762449, 40762796-40762884,40763453-40763518,40763824-40763973 Length = 497 Score = 48.0 bits (109), Expect = 1e-05 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = +1 Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687 +PAA++F +V N A + L I ++ SD+ NH S++ G R S A +F+HN+P Sbjct: 169 KPAAILFGMGYVTNSAIIPAL--IGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPA 226 Query: 688 HYGSLL 705 H +L Sbjct: 227 HLEEVL 232 >01_07_0052 - 40767252-40767347,40767455-40767562,40767689-40767855, 40767930-40768056,40768138-40768299,40768467-40768630, 40768722-40768815,40768892-40769016,40769110-40769255, 40769361-40769449,40769564-40769608,40770165-40770230, 40770332-40770457 Length = 504 Score = 47.6 bits (108), Expect = 1e-05 Identities = 23/66 (34%), Positives = 38/66 (57%) Frame = +1 Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687 +PAA++F +V N A + L + ++ SD+ NH S++ G R S A +F+HN+P Sbjct: 176 KPAAILFGMGYVTNSAIIPAL--VGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPA 233 Query: 688 HYGSLL 705 H +L Sbjct: 234 HLEEVL 239 >11_04_0455 + 17903921-17904046,17904149-17904214,17905028-17905116, 17905513-17905658,17905743-17905867,17905964-17906057, 17906144-17906307,17906449-17906610,17906683-17906809, 17906854-17906862,17906912-17907078,17907113-17907307, 17907398-17907490 Length = 520 Score = 46.8 bits (106), Expect = 2e-05 Identities = 23/66 (34%), Positives = 37/66 (56%) Frame = +1 Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687 +PAA++F +V N A + L + ++ SD+ NH S++ G R S A +F+HN P Sbjct: 161 KPAAILFGMGYVTNSAIIPCL--VGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPA 218 Query: 688 HYGSLL 705 H +L Sbjct: 219 HLEEVL 224 >01_07_0050 - 40751994-40752086,40752193-40752300,40752501-40752667, 40752756-40752882,40752984-40753145,40753674-40753837, 40753931-40754024,40754160-40754284,40754387-40754532, 40754676-40754764,40755524-40755589,40755990-40756148 Length = 499 Score = 42.7 bits (96), Expect = 4e-04 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = +1 Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687 +P+A++ + + N A + L I ++ SD+ NH S++ G R S A +F HN+P Sbjct: 172 KPSAILLAMGYATNSAIIPAL--IGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPA 229 Query: 688 HYGSLL 705 H LL Sbjct: 230 HLEKLL 235 >03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214, 8017301-8017396,8017572-8017712,8017857-8018031, 8018443-8018575,8018661-8018733,8018807-8018900, 8019890-8019981,8020091-8020185,8020267-8020378 Length = 485 Score = 33.5 bits (73), Expect = 0.23 Identities = 16/59 (27%), Positives = 30/59 (50%) Frame = +2 Query: 323 ENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLEGEIAK 499 + + V + + +YLG + + D+ V +++ YG G+ G R G + E +IAK Sbjct: 109 DGKEVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAK 167 >10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451, 5860548-5860643,5860836-5860976,5861799-5861973, 5862416-5862702,5862777-5862870,5863244-5863335, 5863459-5863553,5863648-5863759 Length = 508 Score = 30.3 bits (65), Expect = 2.1 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = +2 Query: 323 ENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAG 457 + + V + + +YLG + + D+ V +++ YG G+ G R+ G Sbjct: 109 DGKEVVNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYG 153 >02_04_0516 + 23593088-23593116,23593209-23593336,23593527-23593714, 23593861-23593919,23594997-23595345,23596081-23596333, 23596404-23597476 Length = 692 Score = 29.1 bits (62), Expect = 4.9 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +3 Query: 78 SRGFRSLGNDETKCPFIQQNSIISEAPKEMTEDIAEPATPYH 203 S+ R G D K N I E+ K + E I EP TPYH Sbjct: 6 SKKSRDRGRDRVKWNEENLNDI--ESTKPVREKITEPKTPYH 45 >05_04_0299 - 19958776-19958858,19958883-19959012,19960131-19960175, 19960252-19960370,19960450-19960543,19961824-19961985, 19962117-19962266,19962472-19962537,19962934-19962981, 19963654-19963866,19963953-19964078,19964155-19964232, 19964600-19964671,19965522-19965953,19966863-19966925, 19967497-19967898 Length = 760 Score = 28.7 bits (61), Expect = 6.5 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +2 Query: 272 VSRLAADGVYPKALEGPENRRVTVWCANDYLGTSRHP---TVQDAAVNAIKSYGTG 430 ++ + G+YPK + + ++T++C L H + A +KS+G G Sbjct: 474 INDIQGQGLYPKVIYDIDTIKITIYCVYSELAAEVHKGRGRIPVADYKIVKSFGEG 529 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,031,520 Number of Sequences: 37544 Number of extensions: 553979 Number of successful extensions: 1408 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1408 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2479731924 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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