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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30951
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868...    50   2e-06
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081...    49   6e-06
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601...    48   1e-05
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678...    48   1e-05
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051...    47   2e-05
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526...    43   4e-04
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801...    33   0.23 
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586...    30   2.1  
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    29   4.9  
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601...    29   6.5  

>10_08_0921 +
           21586034-21586229,21586464-21586576,21586768-21586875,
           21586967-21587205,21587301-21587399,21587448-21587535,
           21587617-21587750,21588274-21588362,21588718-21588751,
           21588830-21588898,21589216-21589339
          Length = 430

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = +2

Query: 209 ELFPRPDQR*KKGLLHRVFRK-VSRLAADGVYPKALEGPENRRVTVWCANDYLGTSRHPT 385
           E FP P    +  +  R+ R  + +  A+G      E   + ++ ++  NDY+G S HP 
Sbjct: 37  ETFPCPGPWDRAAVEIRLDRATLHQWLAEGGEGSGQEEKVDEKLILFSGNDYMGLSSHPA 96

Query: 386 VQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLEGEIAKLHK 508
           ++ AAV A + YG G  G+  I G +   + +E  +A+L K
Sbjct: 97  IRHAAVKAAEEYGMGPRGSALICGYTTYHKMVEESLAELKK 137



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 595 VYSDAGNHASMIQGI----RNSRAPKHIFRHNDPNHYGSLL 705
           ++SDA NHAS+I GI    R       +++H D +H   LL
Sbjct: 179 IFSDALNHASIIDGIRLVERQQEVVSFVYKHCDMSHLELLL 219


>01_06_0628 +
           30707353-30707548,30707846-30707958,30708090-30708197,
           30708305-30708543,30708774-30708861,30708942-30709075,
           30709285-30709498,30709671-30709759,30710194-30710262,
           30710560-30710683
          Length = 457

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 24/74 (32%), Positives = 40/74 (54%)
 Frame = +2

Query: 287 ADGVYPKALEGPENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQ 466
           A+G      E   + ++ ++  NDY+G S HP ++ AAV A + YG G  G+  I G + 
Sbjct: 64  AEGGEATGQEEEVDEKLILFSGNDYMGLSSHPAIRKAAVKAAQEYGMGPRGSALICGYTT 123

Query: 467 MTEKLEGEIAKLHK 508
             + +E  +A+L K
Sbjct: 124 YHKLVEESLAELKK 137



 Score = 31.5 bits (68), Expect = 0.92
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 595 VYSDAGNHASMIQGI----RNSRAPKHIFRHNDPNHYGSLL 705
           V+SDA NHAS+I GI    R       +++H D +H   LL
Sbjct: 179 VFSDALNHASIIDGIRLVERQQEVVAFVYKHCDMHHLDFLL 219


>01_07_0051 -
           40759529-40759624,40759728-40759835,40759972-40760138,
           40760670-40760796,40760885-40761046,40761235-40761398,
           40761561-40761654,40761736-40761860,40762304-40762449,
           40762796-40762884,40763453-40763518,40763824-40763973
          Length = 497

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 24/66 (36%), Positives = 38/66 (57%)
 Frame = +1

Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687
           +PAA++F   +V N A +  L  I    ++ SD+ NH S++ G R S A   +F+HN+P 
Sbjct: 169 KPAAILFGMGYVTNSAIIPAL--IGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPA 226

Query: 688 HYGSLL 705
           H   +L
Sbjct: 227 HLEEVL 232


>01_07_0052 -
           40767252-40767347,40767455-40767562,40767689-40767855,
           40767930-40768056,40768138-40768299,40768467-40768630,
           40768722-40768815,40768892-40769016,40769110-40769255,
           40769361-40769449,40769564-40769608,40770165-40770230,
           40770332-40770457
          Length = 504

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = +1

Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687
           +PAA++F   +V N A +  L  +    ++ SD+ NH S++ G R S A   +F+HN+P 
Sbjct: 176 KPAAILFGMGYVTNSAIIPAL--VGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPA 233

Query: 688 HYGSLL 705
           H   +L
Sbjct: 234 HLEEVL 239


>11_04_0455 +
           17903921-17904046,17904149-17904214,17905028-17905116,
           17905513-17905658,17905743-17905867,17905964-17906057,
           17906144-17906307,17906449-17906610,17906683-17906809,
           17906854-17906862,17906912-17907078,17907113-17907307,
           17907398-17907490
          Length = 520

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +1

Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687
           +PAA++F   +V N A +  L  +    ++ SD+ NH S++ G R S A   +F+HN P 
Sbjct: 161 KPAAILFGMGYVTNSAIIPCL--VGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPA 218

Query: 688 HYGSLL 705
           H   +L
Sbjct: 219 HLEEVL 224


>01_07_0050 -
           40751994-40752086,40752193-40752300,40752501-40752667,
           40752756-40752882,40752984-40753145,40753674-40753837,
           40753931-40754024,40754160-40754284,40754387-40754532,
           40754676-40754764,40755524-40755589,40755990-40756148
          Length = 499

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 22/66 (33%), Positives = 36/66 (54%)
 Frame = +1

Query: 508 EPAALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHNDPN 687
           +P+A++ +  +  N A +  L  I    ++ SD+ NH S++ G R S A   +F HN+P 
Sbjct: 172 KPSAILLAMGYATNSAIIPAL--IGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPA 229

Query: 688 HYGSLL 705
           H   LL
Sbjct: 230 HLEKLL 235


>03_02_0387 -
           8016399-8016575,8016661-8016788,8017073-8017214,
           8017301-8017396,8017572-8017712,8017857-8018031,
           8018443-8018575,8018661-8018733,8018807-8018900,
           8019890-8019981,8020091-8020185,8020267-8020378
          Length = 485

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 323 ENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLEGEIAK 499
           + + V  + + +YLG   +  + D+ V +++ YG G+ G R   G   +    E +IAK
Sbjct: 109 DGKEVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAK 167


>10_02_0148 -
           5859664-5859828,5859916-5860043,5860310-5860451,
           5860548-5860643,5860836-5860976,5861799-5861973,
           5862416-5862702,5862777-5862870,5863244-5863335,
           5863459-5863553,5863648-5863759
          Length = 508

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +2

Query: 323 ENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAG 457
           + + V  + + +YLG   +  + D+ V +++ YG G+ G R+  G
Sbjct: 109 DGKEVVNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYG 153


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 78  SRGFRSLGNDETKCPFIQQNSIISEAPKEMTEDIAEPATPYH 203
           S+  R  G D  K      N I  E+ K + E I EP TPYH
Sbjct: 6   SKKSRDRGRDRVKWNEENLNDI--ESTKPVREKITEPKTPYH 45


>05_04_0299 -
           19958776-19958858,19958883-19959012,19960131-19960175,
           19960252-19960370,19960450-19960543,19961824-19961985,
           19962117-19962266,19962472-19962537,19962934-19962981,
           19963654-19963866,19963953-19964078,19964155-19964232,
           19964600-19964671,19965522-19965953,19966863-19966925,
           19967497-19967898
          Length = 760

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +2

Query: 272 VSRLAADGVYPKALEGPENRRVTVWCANDYLGTSRHP---TVQDAAVNAIKSYGTG 430
           ++ +   G+YPK +   +  ++T++C    L    H     +  A    +KS+G G
Sbjct: 474 INDIQGQGLYPKVIYDIDTIKITIYCVYSELAAEVHKGRGRIPVADYKIVKSFGEG 529


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,031,520
Number of Sequences: 37544
Number of extensions: 553979
Number of successful extensions: 1408
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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