Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30951
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70311-1|CAA94376.2|  420|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81127-5|CAB03390.2|  512|Caenorhabditis elegans Hypothetical pr...    39   0.005
U50307-2|AAA92303.1|  558|Caenorhabditis elegans Serine palmitoy...    39   0.005
U50307-1|AAK71365.1|  586|Caenorhabditis elegans Serine palmitoy...    39   0.005
U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical...    29   5.8  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    28   7.7  

>Z70311-1|CAA94376.2|  420|Caenorhabditis elegans Hypothetical
           protein T25B9.1 protein.
          Length = 420

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 36/60 (60%)
 Frame = +2

Query: 326 NRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLEGEIAKLH 505
           ++ V  +CAN+YLG S HP V  A   A++++G G    R I G   + ++LE +IA+ H
Sbjct: 66  DKPVINFCANNYLGLSSHPEVIAAGQKALETHGAGLSSVRFICGTQDIHKELEQKIAQFH 125



 Score = 36.3 bits (80), Expect = 0.029
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = +1

Query: 520 LIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHND 681
           +++++CF AN      +     D I+ SD  NHAS+I GIR S+A +  ++H D
Sbjct: 131 ILYAACFDANGGIFEVMTGE-QDSII-SDELNHASIIDGIRLSKAKRLRYKHLD 182


>Z81127-5|CAB03390.2|  512|Caenorhabditis elegans Hypothetical
           protein T22G5.5 protein.
          Length = 512

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +1

Query: 517 ALIFSSCFVANDATLSTLAKILPDCIVYSDAGNHASMIQGIRNSRAPKHIFRHND 681
           A++F   F  N   + +L       ++ SD  NHAS++ G R S A   +FRHND
Sbjct: 198 AIVFPMGFATNSMNIPSLVD--KGSLILSDRLNHASLVTGCRLSGAHTVVFRHND 250



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +2

Query: 245 GLLHRVFRKVSRLAADGVYPKALEGPENRRVTVWCANDYLGTSRHPTV-QDAAVNAIKSY 421
           G+   + R   R   D  + +   G E+  + +   N YLG S    V  +AA   I  Y
Sbjct: 107 GVPGAIVRLKDRYTDDHGWTQKYTGTESEVINLGSYN-YLGFSHRSGVCAEAAAAHIDKY 165

Query: 422 GTGAGGTRNIAGNSQMTEKLEGEIAK 499
           G   GG+R   GN    + +E  IA+
Sbjct: 166 GINCGGSRQEIGNHVAHKSVESTIAQ 191


>U50307-2|AAA92303.1|  558|Caenorhabditis elegans Serine palmitoyl
           transferase familyprotein 2, isoform a protein.
          Length = 558

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 535 CFVANDATLSTLAKILPD--CIVYSDAGNHASMIQGIRNSRAPKHIFRHND 681
           CF    AT S  A  L D   ++ SD  NHAS+I G R S A   +F HND
Sbjct: 239 CFSMGFATNSMNAPCLVDKHSLIISDKYNHASLILGCRLSGASTKVFEHND 289


>U50307-1|AAK71365.1|  586|Caenorhabditis elegans Serine palmitoyl
           transferase familyprotein 2, isoform b protein.
          Length = 586

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 535 CFVANDATLSTLAKILPD--CIVYSDAGNHASMIQGIRNSRAPKHIFRHND 681
           CF    AT S  A  L D   ++ SD  NHAS+I G R S A   +F HND
Sbjct: 267 CFSMGFATNSMNAPCLVDKHSLIISDKYNHASLILGCRLSGASTKVFEHND 317


>U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical
           protein C34G6.5 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 164 FLRSFRNDRVLLNEGAFGFVISQRTKSTRYNRAIISV 54
           F R ++    ++ EG+FG VIS   ++T+  RAI ++
Sbjct: 23  FQRKYQLQENIIGEGSFGTVISATCRTTQEKRAIKAI 59


>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
           protein F25G6.2 protein.
          Length = 1143

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 384 LCRMLLSTLSNPMEQEQVVQGILLETPR*LRSLKEKL-QNCI 506
           +C+ML + L   ME+E +   +LLETP    +  E+L Q C+
Sbjct: 655 MCKMLDAMLERNMEKEALFYKVLLETPLLTPNAIERLKQVCL 696


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 129 QQNSIISEAPKEMTEDIAEPATPYHYENFFHDQINAKKRDYSIAFLERC 275
           Q+  +++  PK +  ++ +     H E  FH     K  D SI F + C
Sbjct: 202 QEKILLAVLPKNIAFEVKKDMQETHEERMFHKIYIRKYEDISILFADIC 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,446,953
Number of Sequences: 27780
Number of extensions: 476270
Number of successful extensions: 1261
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)