Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30950
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 178 5e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 169 2e-44
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 160 1e-41
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 101 1e-23
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 7.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 7.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 178 bits (433), Expect = 5e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 4 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 183
A +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA
Sbjct: 283 AGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 342
Query: 184 QVIVLNHPGQISNGYTPVLDCHTA 255
QVIVLNHPGQISNGYTPVLDCHTA
Sbjct: 343 QVIVLNHPGQISNGYTPVLDCHTA 366
Score = 150 bits (363), Expect = 2e-38
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = +3
Query: 255 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAV 434
HIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAV
Sbjct: 367 HIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAV 426
Query: 435 RDMRQTVAVGVIKAVNFKEAGG 500
RDMRQTVAVGVIKAV FK+A G
Sbjct: 427 RDMRQTVAVGVIKAVTFKDAAG 448
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 169 bits (412), Expect = 2e-44
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 4 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTA 183
A +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTA
Sbjct: 283 AALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTA 342
Query: 184 QVIVLNHPGQISNGYTPVLDCHTA 255
QVIVLNHPGQISNGYTPVLDCHTA
Sbjct: 343 QVIVLNHPGQISNGYTPVLDCHTA 366
Score = 147 bits (357), Expect = 9e-38
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 255 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAV 434
HIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAV
Sbjct: 367 HIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAV 426
Query: 435 RDMRQTVAVGVIKAVNFKEAGG 500
RDMRQTVAVGVIK+V FK+ G
Sbjct: 427 RDMRQTVAVGVIKSVTFKDTQG 448
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 160 bits (389), Expect = 1e-41
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 25 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 204
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 205 PGQISNGYTPVLDCHTA 255
PGQISNGYTPVLDCHTA
Sbjct: 61 PGQISNGYTPVLDCHTA 77
Score = 76.6 bits (180), Expect = 2e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 255 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 380
HIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 78 HIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 101 bits (241), Expect = 1e-23
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 4 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 150
A +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 226 AGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 591 KYRSCMKNCAVNSSSYFLPLVAFS 520
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 591 KYRSCMKNCAVNSSSYFLPLVAFS 520
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 591 KYRSCMKNCAVNSSSYFLPLVAFS 520
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 103 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 210
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 599 RKGFRRKKGLQTHSF 643
+KGF+ K+G+Q H +
Sbjct: 352 KKGFKLKQGIQFHLY 366
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 630 CSPFFLRKPFR*MKYRSCMKN 568
C FF R + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = -2
Query: 364 LTMAASPDLMDFGLTSVDLPVRRSTFSLISANLQAMWQCGNPILVCNRL 218
LT++ +L + L +R +++ + +L +W+ G+P+ V L
Sbjct: 156 LTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNL 204
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = -2
Query: 364 LTMAASPDLMDFGLTSVDLPVRRSTFSLISANLQAMWQCGNPILVCNRL 218
LT++ +L + L +R +++ + +L +W+ G+P+ V L
Sbjct: 156 LTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNL 204
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,911
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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