Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30947
(572 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 24 0.80
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 0.80
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 0.80
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 5.6
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 21 9.9
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 9.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 9.9
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 24.2 bits (50), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 57 EMKSREKEAEERLRNADAENKTLTKKLEQQTSKS 158
E RE+E +ER + E + +K+EQQT S
Sbjct: 73 EQARREREEQERHKQQQQEKQ---QKIEQQTHSS 103
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 24.2 bits (50), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 57 EMKSREKEAEERLRNADAENKTLTKKLEQQTSKS 158
E RE+E +ER + E + +K+EQQT S
Sbjct: 224 EQARREREEQERHKQQQQEKQ---QKIEQQTHSS 254
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 24.2 bits (50), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 57 EMKSREKEAEERLRNADAENKTLTKKLEQQTSKS 158
E RE+E +ER + E + +K+EQQT S
Sbjct: 283 EQARREREEQERHKQQQQEKQ---QKIEQQTHSS 313
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 195 RVKQRDKRLEEAAAHETALRARSRPGT*PLSSWRRPC 305
R K+R ++ + A + + R+R G + W +PC
Sbjct: 554 RGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPC 590
Score = 21.8 bits (44), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 162 RCSYSFVVPVSSSASCSLRQRFSISPRLPSH 70
R Y +P+S+S+ S RFS + +P H
Sbjct: 203 RSPYPSALPISTSSLPSDFYRFSPTGLIPPH 233
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 195 RVKQRDKRLEEAAAHETALRARSRPGT*PLSSWRRPC 305
R K+R ++ + A + + R+R G + W +PC
Sbjct: 446 RGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPC 482
Score = 21.8 bits (44), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 162 RCSYSFVVPVSSSASCSLRQRFSISPRLPSH 70
R Y +P+S+S+ S RFS + +P H
Sbjct: 95 RSPYPSALPISTSSLPSDFYRFSPTGLIPPH 125
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNA 104
V + +KE++ +K+AEE R A
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKA 1087
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNA 104
V + +KE++ +K+AEE R A
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKA 1087
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNA 104
V + +KE++ +K+AEE R A
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKA 1087
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNA 104
V + +KE++ +K+AEE R A
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKA 1087
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKTLTK-KLE 140
E+E + + EAEE + + E+K K K+E
Sbjct: 218 EREKELSDDEAEEEKKEEEGEDKDKDKPKIE 248
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 17 AEGIRGSTRQHRKRDE 64
AE R T+QH +RDE
Sbjct: 60 AEVKRAITQQHSERDE 75
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 472 RACVRPPHPASSLRLFDV 419
R ++P P+SS R+ D+
Sbjct: 19 RMQIKPQSPSSSSRILDI 36
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 472 RACVRPPHPASSLRLFDV 419
R ++P P+SS R+ D+
Sbjct: 19 RMQIKPQSPSSSSRILDI 36
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,071
Number of Sequences: 336
Number of extensions: 1320
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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