Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30947
(572 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g58840.1 68416.m06558 expressed protein 39 0.003
At2g30500.1 68415.m03715 kinase interacting family protein simil... 38 0.006
At5g53020.1 68418.m06585 expressed protein 34 0.077
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 34 0.077
At3g51720.1 68416.m05671 expressed protein contains Pfam PF05701... 33 0.18
At3g04990.1 68416.m00542 hypothetical protein 33 0.18
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 32 0.24
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 32 0.24
At1g75870.1 68414.m08812 hypothetical protein 32 0.24
At2g22795.1 68415.m02704 expressed protein 31 0.41
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.55
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 0.55
At4g27120.2 68417.m03898 expressed protein 31 0.55
At4g27120.1 68417.m03897 expressed protein 31 0.55
At3g02930.1 68416.m00288 expressed protein ; expression support... 31 0.55
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 31 0.55
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 0.55
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 31 0.55
At1g06850.1 68414.m00730 bZIP transcription factor, putative con... 31 0.55
At2g45820.1 68415.m05698 DNA-binding protein, putative identical... 31 0.72
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 31 0.72
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 30 0.95
At4g31570.1 68417.m04483 expressed protein 30 0.95
At3g51910.1 68416.m05694 heat shock transcription factor family ... 30 0.95
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 30 1.3
At3g50370.1 68416.m05508 expressed protein 30 1.3
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 30 1.3
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 30 1.3
At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 29 1.7
At3g55060.1 68416.m06115 expressed protein contains weak similar... 29 1.7
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 29 1.7
At3g12020.1 68416.m01490 kinesin motor protein-related similar t... 29 1.7
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 1.7
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 1.7
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 29 1.7
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 29 1.7
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 29 2.2
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 2.2
At5g25870.1 68418.m03069 hypothetical protein 29 2.2
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 2.2
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 29 2.2
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 29 2.2
At5g65740.1 68418.m08273 expressed protein 29 2.9
At5g52550.1 68418.m06525 expressed protein 29 2.9
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 29 2.9
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 29 2.9
At3g19370.1 68416.m02457 expressed protein 29 2.9
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 29 2.9
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 2.9
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 28 3.8
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 28 3.8
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 3.8
At4g31340.1 68417.m04445 myosin heavy chain-related contains wea... 28 3.8
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 28 3.8
At1g10650.1 68414.m01207 expressed protein 28 3.8
At1g01530.1 68414.m00069 MADS-box protein (AGL28) similar to MAD... 28 3.8
At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal hydrolase-r... 28 5.1
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 28 5.1
At4g38560.1 68417.m05459 expressed protein 28 5.1
At4g26630.1 68417.m03837 expressed protein 28 5.1
At4g10790.1 68417.m01759 UBX domain-containing protein low simil... 28 5.1
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 28 5.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 5.1
At5g38150.1 68418.m04598 expressed protein 27 6.7
At5g11390.1 68418.m01329 expressed protein 27 6.7
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 27 6.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 6.7
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 27 6.7
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 27 6.7
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 27 6.7
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 27 6.7
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 6.7
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 27 8.9
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 8.9
At4g02710.1 68417.m00366 kinase interacting family protein simil... 27 8.9
At3g50040.1 68416.m05471 expressed protein putative protein - Ar... 27 8.9
At2g30380.1 68415.m03697 expressed protein contains Pfam profile... 27 8.9
At2g17990.1 68415.m02091 expressed protein 27 8.9
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 27 8.9
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 27 8.9
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +3
Query: 30 GVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQR 209
GV+ +E++++ E + +E R EN+ L ++LE+ T + E+ V + +R +
Sbjct: 19 GVKTTELERKIEDMENKNQELTR----ENRELKERLERLTGEIEEMKDVEAEMNQRFGEM 74
Query: 210 DKRLEEAAAHETALRARS 263
+K +EE + AL A S
Sbjct: 75 EKEIEEYEEEKKALEAIS 92
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 18 QKEFGVQLANIEKEM---KSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKF 188
+ + G QL +E + K + E EE+LR T+K+ +S+ L + K
Sbjct: 381 RSQLGEQLRELESHIRLIKEEKAETEEKLRGG-------TEKISGMRDESNVLREEIGKR 433
Query: 189 EERVKQRDKRLEEAAAHETALRARS 263
EE++K+ +K +EE + LR RS
Sbjct: 434 EEKIKETEKHMEELHMEQVRLRRRS 458
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 33.9 bits (74), Expect = 0.077
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
Q E L KE L NIEK + E +ERL+ + ++ K +E++ K L L+
Sbjct: 82 QIEALMKE----LRNIEKRKRHSLLELQERLKEKEGLLESKDKAIEEEKRKCELLEERLV 137
Query: 183 KFEERVKQ-RDKRLEEAAAHETAL 251
K E+ V+ R+ + + H + L
Sbjct: 138 KAEKEVQDLRETQERDVQEHSSEL 161
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 33.9 bits (74), Expect = 0.077
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
+KE L K ++ +EK +K +K E RL++ + KTL ++ Q +SK +
Sbjct: 756 EKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEKNIKTLKARI-QASSKD-------L 807
Query: 183 KFEERVKQRDKRLEEAAAHE 242
K E V++R +EA E
Sbjct: 808 KGHENVRERLVMEQEAVTQE 827
>At3g51720.1 68416.m05671 expressed protein contains Pfam PF05701:
Plant protein of unknown function (DUF827)
Length = 407
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 LTIKQLEKTVLERENRLYQVTTQLDEMKR-VQEMVAKLMSKSTSANCATDV 424
L +LEK ++E+E +V L+ K V+E+ +K+ +K NC +V
Sbjct: 54 LKASELEKELIEKEGETLKVLKSLESTKAIVEELKSKIQNKEDKENCDMNV 104
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 32.7 bits (71), Expect = 0.18
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 36 QLANIEKEMKSREKEA---EERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQ 206
QL + E+K R EA ++R R + E T K+L + E L K V+
Sbjct: 108 QLVQVMAELKRRYSEARHVQKRKREMEDETATKKKELSMTVDQIQESGKQLEKKSREVEL 167
Query: 207 RDKRLEE 227
+DK +EE
Sbjct: 168 KDKEIEE 174
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSRE---KEAEERLRNADAENKTLTKKLEQQTSKSSELAG 173
+++ L++EF + LAN ++E+ + ++AE+ L ++ K KLE S ELA
Sbjct: 659 REDALREEFSITLANKDEEITEKATKLEKAEQSLTVLRSDLKVAESKLE---SFEVELAS 715
Query: 174 VLIKFEERVKQRDKRLEEAAAHE 242
+ + E + D ++A A+E
Sbjct: 716 LRLTLSEMTDKLDSANKKALAYE 738
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRD 212
VQL + KE++ R+ E +R + + K + K+LEQ + +S V + E+ K R+
Sbjct: 330 VQLESQIKELEIRKLELAKREAENETQRKIVAKELEQNAAINSY---VQLSALEQQKTRE 386
Query: 213 KRLEEAAAHETALRAR 260
K A H+ L R
Sbjct: 387 KAQRLAVDHKEKLHKR 402
>At1g75870.1 68414.m08812 hypothetical protein
Length = 165
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +3
Query: 54 KEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAA 233
++MK + E E R R A AE + K ++T +LAG LI+ +K+R++
Sbjct: 77 EDMKKQCGEMEIRTRKALAEAEFWRKMTNEKTDLCRDLAGRLIE----MKKRERATRRLG 132
Query: 234 AHETALRARSRPG 272
E A +A S G
Sbjct: 133 VREMAEKAESSTG 145
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.5 bits (68), Expect = 0.41
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 3 QKEQLQKEFGV-QLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTS-KSSELAGV 176
+ E+++KE Q EKE + EKE E + E +T TK+ E+ +S +S E
Sbjct: 581 ENEKIEKEESAPQEETKEKENEKIEKE-ESASQEETKEKETETKEKEESSSNESQENVNT 639
Query: 177 LIKFEERVKQRDKRLEE 227
+ +E+V++ +K+ +E
Sbjct: 640 ESEKKEQVEENEKKTDE 656
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.1 bits (67), Expect = 0.55
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSRE----------KEAEERLRNADAENKTLTKKLEQQTSKS 158
E Q+E +++ +E +++S E K+AEE + ++N + KLEQ +
Sbjct: 322 ETHQRESSTRVSELEAQLESSEQRISDLTVDLKDAEEENKAISSKNLEIMDKLEQAQNTI 381
Query: 159 SELAGVLIKFEERVKQRDKRL 221
EL L + ++R K+++ L
Sbjct: 382 KELMDELGELKDRHKEKESEL 402
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 57 EMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEE-AA 233
++ + K AEE + ++N KLEQ + EL L K ++ ++++ L
Sbjct: 172 DLSASLKAAEEENKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVE 231
Query: 234 AHETALRARS 263
HET R S
Sbjct: 232 VHETHQRDSS 241
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 36 QLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSS 161
QL +EM +R E E+ + E LT+KLE +SS
Sbjct: 784 QLEAQNREMVARISELEKTMEERGTELSALTQKLEDNDKQSS 825
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 69 REKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEER-VKQRDKRLEEAAA 236
REKEAE R D E + L +K+E++ + E + F++R + +RLE+A A
Sbjct: 1131 REKEAERLKRERDLEMEQL-RKVEEEREREREREKDRMAFDQRALADARERLEKACA 1186
>At4g27120.2 68417.m03898 expressed protein
Length = 298
Score = 31.1 bits (67), Expect = 0.55
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 51 EKEMKSRE--KEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLE 224
EK+ + RE ++AEE R ++ N E + K E +K EE K R + E
Sbjct: 99 EKKRQEREAQRQAEEATR--ESRNTKQDWYAEMRRKKDEEREAEELKLEEEEKARQAKEE 156
Query: 225 EAAAHE 242
EAAA E
Sbjct: 157 EAAALE 162
>At4g27120.1 68417.m03897 expressed protein
Length = 298
Score = 31.1 bits (67), Expect = 0.55
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 51 EKEMKSRE--KEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLE 224
EK+ + RE ++AEE R ++ N E + K E +K EE K R + E
Sbjct: 99 EKKRQEREAQRQAEEATR--ESRNTKQDWYAEMRRKKDEEREAEELKLEEEEKARQAKEE 156
Query: 225 EAAAHE 242
EAAA E
Sbjct: 157 EAAALE 162
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIK 185
K ++ + G ++ ++++++++ + E +++ + + L LE S G +
Sbjct: 252 KNEIALKLGAEIVDLKRDLENA-RSLEAKVKELEMIIEQLNVDLEAAKMAESYAHGFADE 310
Query: 186 FEERVKQRDKRLEEA 230
++ + K+ +KRLEEA
Sbjct: 311 WQNKAKELEKRLEEA 325
>At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:433663
from [Arabidopsis thaliana]
Length = 1529
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKF 188
E L +E AN+E+E K R +A + A ++ KKLE K+ +L + +
Sbjct: 979 EALTEEVEGLKANLEQE-KQRADDATRKFDEAQESSEDRKKKLEDTEKKAQQLQESVTRL 1037
Query: 189 EER 197
EE+
Sbjct: 1038 EEK 1040
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 31.1 bits (67), Expect = 0.55
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 3 QKEQL-QKEFGVQLANIEKEMKSREKEAEERLRNADAE-------NKTLTKKLEQQTSKS 158
QK L Q+E V IEK++K +EKE EE R D + +TK+LE+ T+K
Sbjct: 282 QKRNLNQREEKVN--EIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELTTKE 339
Query: 159 SE 164
E
Sbjct: 340 KE 341
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 31.1 bits (67), Expect = 0.55
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 3 QKEQL-QKEFGVQLANIEKEMKSREKEAEERLRNADAE-------NKTLTKKLEQQTSKS 158
QK L Q+E V IEK++K +EKE EE R D + +TK+LE+ T+K
Sbjct: 295 QKRNLNQREEKVN--EIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELTTKE 352
Query: 159 SE 164
E
Sbjct: 353 KE 354
>At1g06850.1 68414.m00730 bZIP transcription factor, putative
contains Pfam profile: PF00170 bZIP transcription factor
Length = 337
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +3
Query: 39 LANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQ 206
LAN E+K R + E++ + +A N+ L K++E+ ++ E++G F+ ++Q
Sbjct: 204 LANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQ 259
>At2g45820.1 68415.m05698 DNA-binding protein, putative identical to
DNA-binding protein gi|601843|gb|AAA57124 [Arabidopsis
thaliana]; contains Pfam domain, PF03766: Remorin,
N-terminal region; contains Pfam domain, PF03763:
Remorin, C-terminal region
Length = 190
Score = 30.7 bits (66), Expect = 0.72
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 33 VQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQ----QTSKSSELAGVLIKFEERV 200
V LA++EKE K+ +A E + AEN+ KK+ + SK + + L K EE++
Sbjct: 71 VILADLEKEKKTSFIKAWEESEKSKAENRA-QKKISDVHAWENSKKAAVEAQLRKIEEKL 129
Query: 201 KQRDKRLEEAAAHETA 248
+++ + E ++ A
Sbjct: 130 EKKKAQYGEKMKNKVA 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 30.7 bits (66), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 54 KEMKSREKEAEERLRNADAENKTLTKKL 137
KEMK +++ EE+L AE +TL K+L
Sbjct: 669 KEMKDEKRKTEEKLSETKAEKETLKKQL 696
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 30.3 bits (65), Expect = 0.95
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTS--KSSE-LAG 173
+KE K ++ +E +K +K E RL++ + KT+ +++ + KS E
Sbjct: 759 EKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEKNIKTIKAQMQAASKDLKSHENEKE 818
Query: 174 VLIKFEERVKQRDKRLEEAAAHETALRAR 260
L+ EE +KQ LE +H T+L +
Sbjct: 819 KLVMEEEAMKQEQSSLE---SHLTSLETQ 844
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/94 (21%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSRE-------KEAEERLRNADAENKTLTKKLEQQTSKSSEL 167
E+ +KE V +AN+++E+ ++ E +++ A A K + L+ +++ ++
Sbjct: 2274 ERNEKEMKVIIANLQRELHEKDIQNNRTCNELVGQVKEAQAGAKIFAEDLQSASARMRDM 2333
Query: 168 ---AGVLIKFEERVKQRDKRLEEAAAHETALRAR 260
G+L++ + +K+R K L A + L+ +
Sbjct: 2334 QDQLGILVRERDSMKERVKELLAGQASHSELQEK 2367
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 30.3 bits (65), Expect = 0.95
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
+K+ L E V L ++ KS K E+R+ + + + + L + S L +L
Sbjct: 139 EKQVLMMEI-VSLRQQQQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLL- 196
Query: 183 KFEERVKQRDKRLEEAAAHETALRAR 260
KQRDK+++E +E+A R R
Sbjct: 197 ------KQRDKKIKELEDNESAKRKR 216
>At4g32610.1 68417.m04643 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SP|P40513
Mitochondrial acidic protein MAM33, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02330: Mitochondrial glycoprotein
Length = 557
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSS-ELAGVLIK 185
E+ + G A+ +K+ K ++KE +E + + ++ EQ+ S SS ++ L K
Sbjct: 208 EKKENTTGESKASKKKKKKDKQKELKESQSEVKSNSDAASESAEQEESSSSIDVKERLKK 267
Query: 186 FEERVKQRDKRLEEAAAHETALRARSR 266
K++ + + A+ A A +R
Sbjct: 268 IASMKKKKSSKEVDGASTAAAKEAAAR 294
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 18 QKEFGVQLANIEKEMKSR-EKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEE 194
++E ++LA E+E + R +E +ER R + E + + EQ+ +++ A L K +E
Sbjct: 490 EQERVIELARTEEEERLRLAREQDERQRRLEEEAREAAFRNEQERLEATRRAEELRKSKE 549
Query: 195 RVKQR 209
K R
Sbjct: 550 EEKHR 554
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREK---EAEERLRNADAENKTLTKKLEQQTSKSSELAG 173
Q+E +K ++ +E + +S++K + +E + L++KLE+ K E
Sbjct: 438 QEEAEKKAMAEKIERLELQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKLEETEH 497
Query: 174 VLIKFEERVKQRDKRLEE 227
L EE+ +Q + ++E
Sbjct: 498 SLFDLEEKYRQANATIKE 515
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 78 EAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLE 224
EA+E L L KKL ++ ++ +LA VL KFE R+K+ + +++
Sbjct: 384 EAQETLLKEKLSK--LEKKLAEEGTEKLKLAKVLSKFETRIKELEVKVK 430
>At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5
protein GI:2251085 from [Arabidopsis thaliana]
Length = 168
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQT 149
Q + +K + +L N K+++++ E EERL EN+ L L+ T
Sbjct: 104 QARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTT 152
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKF 188
++L+KE A +EKE+ R E +L E K L +++ + + L L F
Sbjct: 391 QRLEKEKSELQAGLEKELDRRSGEWTSKLEKFQLEEKKLRERVRELAEHNVSLQRELSAF 450
Query: 189 EE 194
E
Sbjct: 451 HE 452
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +3
Query: 9 EQLQKEFGVQLANIE--KEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
++L+KE +Q A E K+ +++E+EA+ L + + + T +LE +T + + + +LI
Sbjct: 237 QRLRKEKELQRAERERRKQQEAQEREAQAALNDGEVISIHSTSELEAKTKAAKKASRLLI 296
Query: 183 KF 188
+
Sbjct: 297 LY 298
>At3g12020.1 68416.m01490 kinesin motor protein-related similar to
putative kinesin heavy chain GB:AAD23684 GI:4567271 from
[Arabidopsis thaliana]
Length = 1030
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIK 185
K+QL + + KE+K KE E + N+ L ++ +S A L
Sbjct: 828 KQQLSEALELAQGTKIKELKQDAKELSESKEQLELRNRKLAEESSYAKGLASAAAVELKA 887
Query: 186 FEERV----KQRDKRLEEAAAHETALRARSRPGT 275
E V Q ++ E A ++ + R++ GT
Sbjct: 888 LSEEVAKLMNQNERLAAELATQKSPIAQRNKTGT 921
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 63 KSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAAAHE 242
K +EKE EER R+ AEN + K+ TS S + + K R +R + +
Sbjct: 794 KEKEKE-EERSRHRRAENSSKDKRRRSPTSNES-------SDDSKRKSRSRRRSVSPSPV 845
Query: 243 TALRARSRPGT*PLS-SWRRPCWSARTGCTRSPLSSTR 353
+ R RS P + S +R S R + SP S R
Sbjct: 846 RSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRR 883
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 63 KSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAAAHE 242
K +EKE EER R+ AEN + K+ TS S + + K R +R + +
Sbjct: 764 KEKEKE-EERSRHRRAENSSKDKRRRSPTSNES-------SDDSKRKSRSRRRSVSPSPV 815
Query: 243 TALRARSRPGT*PLS-SWRRPCWSARTGCTRSPLSSTR 353
+ R RS P + S +R S R + SP S R
Sbjct: 816 RSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRR 853
>At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:433663
from (Arabidopsis thaliana)
Length = 1520
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 78 EAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERV 200
EA+ ++A +N+ L KKLE+ K +L + +F+E+V
Sbjct: 994 EAQHAYQSALVQNEELCKKLEEAGRKIDQLQDSVQRFQEKV 1034
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNA-DAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEE 227
++E + RE+ AEE L+ +A+ K ++ ++ + EL + + EE ++++ EE
Sbjct: 149 QQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKEEAMRRKKAEEEE 208
Query: 228 AAAHETAL--RARSRP 269
+ L + +SRP
Sbjct: 209 ERLKQMKLLGKNKSRP 224
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIK 185
KEQ +K+ + A +KE + ++KE +E+ ++ + + K KLE++ +
Sbjct: 61 KEQEKKD-KEKAAKDKKEKEKKDKEEKEK-KDKERKEKEKKDKLEKEKKDKERKEKERKE 118
Query: 186 FEERVKQR-DKRLEEAAA 236
E + K++ DK EAAA
Sbjct: 119 KERKAKEKKDKEESEAAA 136
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 54 KEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAA 233
K +K + K+ E++L ++ +TK+ E ++ +L + K ++ + +K+LEE
Sbjct: 347 KHVKQKIKKLEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIK 406
Query: 234 A 236
A
Sbjct: 407 A 407
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 48 IEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSS---ELAGVLIKFEERVKQRDKR 218
++ E K E E E N + KTL +K +++ KSS EL +IK + + ++
Sbjct: 82 VKLEKKYYELEEVENRENLQMKEKTLKRKYKRELKKSSKIKELEDRMIKAGQINDEHERE 141
Query: 219 LEEAAAHETALRARSR 266
L++ + L R R
Sbjct: 142 LKKKCSKIKELEDRIR 157
>At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC)
family protein similar to SMC1 protein [Bos taurus]
GI:4235253, 14S cohesin SMC1 subunit (SMC protein)
[Xenopus laevis] GI:3328231; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEA 230
E ++K+ EKEAEERL + N+ K + + ++ ++ + K E + + LE
Sbjct: 820 ETQLKTAEKEAEERL---ELSNQLAKLKYQLEYEQNRDVGSRIRKIESSISSLETDLEGI 876
Query: 231 AAHETALRARSRPGT*PLSSWRR 299
+ + + T +++W++
Sbjct: 877 QKTMSERKETAVKITNEINNWKK 899
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 45 NIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLE 224
+++K K + K ++E + K L KK+E K + +G L + +++ + E
Sbjct: 328 DVDKRKKEKGKHSKE-IEQMQKSIKELNKKMELFNKKRQDSSGKLPMLDSQLQDYFRLKE 386
Query: 225 EAAAHETALR 254
EA LR
Sbjct: 387 EAGMKTIKLR 396
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEA 230
E EM S+ E L + A+ L +KLE L + K + +Q K + A
Sbjct: 214 EDEMVSKVSRIGEELEESRAKTAHLKEKLESMEEAKDALEAEMKKLRVQTEQWRKAADAA 273
Query: 231 AA---HETALRARSRPGT 275
AA E + R R G+
Sbjct: 274 AAVLSGEFEMNGRDRSGS 291
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEA 230
E EM S+ E L + A+ L +KLE L + K + +Q K + A
Sbjct: 214 EDEMVSKVSRIGEELEESRAKTAHLKEKLESMEEAKDALEAEMKKLRVQTEQWRKAADAA 273
Query: 231 AA---HETALRARSRPGT 275
AA E + R R G+
Sbjct: 274 AAVLSGEFEMNGRDRSGS 291
>At5g65740.1 68418.m08273 expressed protein
Length = 216
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 410 CATDVEQPQR*SRMRRTDAG 469
C DV+QP R S +RR DAG
Sbjct: 41 CVVDVKQPARASAIRRIDAG 60
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEM-----KSREKEAEERLRNADAENKTLTKKLEQQTSKSSEL 167
+K+Q++KE G A +E++ K +E+E ER++ A+ + +++E+ + S+ +
Sbjct: 159 KKKQMKKE-GQLDAAVEEDSAYAAKKKQEREELERIKQAERKK----RRIEKSIATSAAI 213
Query: 168 AGVLIKFEERVKQRDKRLEEAAA 236
L K + R + +RL+E A
Sbjct: 214 RAELEKKKLRKLEEQRRLDEEGA 236
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7)
identical to COP1-Interacting Protein 7 (CIP7)
GI:3327868 from [Arabidopsis thaliana]
Length = 1058
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 69 REKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKF-EERVKQRDKRLEEAAAHET 245
RE++ + L E T L Q+TS+ + E+ + ++K+ + +
Sbjct: 669 REQDVKPTLLPWTPEIDFETNTLAQRTSRIDLITATKASAGEQTLDGKEKKSRGISKGKD 728
Query: 246 AL-RARSRPGT*PLSSWRRPCWSARTGCTRS 335
A RA SRP P S +RP W +R ++S
Sbjct: 729 AKSRASSRPD--PASKAKRPAWGSRAAVSKS 757
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1097
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +3
Query: 48 IEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEE 227
+EKE E + EER+ A+ L K + Q+ + + A + + + R K
Sbjct: 131 VEKERDELESKVEERVLKAEKNRMLLFKAMAQRRAAKRQRAAQSLMKKAIQETRYKESVR 190
Query: 228 AAAHETALRARSR 266
AA ++ A S+
Sbjct: 191 AAIYQKRAAAESK 203
>At3g19370.1 68416.m02457 expressed protein
Length = 704
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKTLTKKLEQ 143
++E++ + +E+ E++RN +AE KTL + E+
Sbjct: 483 KQELRKKLEESVEKIRNLEAEMKTLRENKEK 513
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 33 VQLANIEKEMKSREK-EAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQR 209
++ A++EK+ + + E RL +AEN LT+ L K + +++V+ +
Sbjct: 376 LEAADLEKQKHNNTRMEVLTRLAGLEAENAELTRSLAAGQKKLETQIDQVAVLKQQVELK 435
Query: 210 DKRLEE 227
+ LEE
Sbjct: 436 ESTLEE 441
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIE-KEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
+E + E + AN+E +E+KS+ K EE + + TLT + E S + +
Sbjct: 734 EENMVLENSLFNANVELEELKSKLKSLEESCHLLNDDKTTLTSERESLLSHIDTMRKRIE 793
Query: 183 KFE-ERVKQRDKRLEEAAAHETALR 254
E E + + K LE A E++L+
Sbjct: 794 DLEKEHAELKVKVLELATERESSLQ 818
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
++E++++E + +E+E+ REK+ + + + E + +K+E++ S +L
Sbjct: 159 EREKIEREKEREREKMEREIFEREKDRLKLEKEREIEREREREKIEREKSHEKQLGDA-- 216
Query: 183 KFEERVKQRDKRL 221
E + Q DK +
Sbjct: 217 DREMVIDQTDKEI 229
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +3
Query: 18 QKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEER 197
+KE + N K+++++EKE E RL A + K+E+ + E + ++
Sbjct: 544 EKELAIMAKN--KDLEAKEKELEARLMLVHAREDKIHAKIERLQQERDEAVAKAERIDKE 601
Query: 198 VKQRDKR 218
+++ R
Sbjct: 602 LQEDRSR 608
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIE-KEMKSREKEAEERLRNADAENKTLTKKLE----QQTSKSSEL 167
QKE+ + + + A+ E K+++ + ERL+ A+ E+K KKLE T+ +
Sbjct: 133 QKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQKQS 192
Query: 168 AGVLIKFEERVKQRDKRLEEAAAHET 245
A +L+++ +R+ + ++ L+ +T
Sbjct: 193 AELLLEY-DRLLEDNQHLQSQILGKT 217
>At4g31340.1 68417.m04445 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, nonmuscle type A
(Cellular myosin heavy chain, type A) (Nonmuscle myosin
heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo
sapiens]
Length = 437
Score = 28.3 bits (60), Expect = 3.8
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 12 QLQKEFGVQLANIEKEM-KSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKF 188
++ K F ++ N EK+ ++R EAE++LR ++ L K E+Q +K +L IK
Sbjct: 122 EVLKNF-LEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNEEQKNKIGKLERA-IKI 179
Query: 189 EERVKQRDKRLEEAAAHETALRA 257
E R K LE + L A
Sbjct: 180 AEEEMLRTK-LEATTKAKELLEA 201
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 99 NADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRL 221
N DA+NKT + TS SS + VL+ E V R+
Sbjct: 596 NKDAQNKTFNGNTNKPTSSSSMVVSVLLDPREVVDSETDRV 636
>At1g10650.1 68414.m01207 expressed protein
Length = 339
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/90 (20%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIK 185
++ Q+ L +EK + + +E + + + + +NK L +++ +Q + ++ K
Sbjct: 169 RDMKQRHIASFLTTLEKGVSKKLQEKDHEINDMNKKNKELVERI-KQVAMEAQNWHYRAK 227
Query: 186 FEERVKQRDK-RLEEAAAHETALRARSRPG 272
+ E V K L++A +H ++ A + G
Sbjct: 228 YNESVVNVLKANLQQAMSHNNSVIAAADQG 257
>At1g01530.1 68414.m00069 MADS-box protein (AGL28) similar to
MADS-box transcription factor GI:6580943 from [Picea
abies]; contains Pfam profile PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain)
Length = 247
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +3
Query: 9 EQLQKEFGVQLANIEKEMKSREKEAEERLRNADAE----NKTLTKKLEQQTSKSSELAGV 176
+ L + +A EKE ++++ + N DAE N L Q TS +L +
Sbjct: 96 QMLNESLTEVMAEKEKEQETKQSIVQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEAL 155
Query: 177 LIKFEERVKQRDKR 218
+ +E+V Q R
Sbjct: 156 KKEVDEKVAQLHHR 169
>At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1149
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 48 IEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEE 227
+E+E KSR K+ + RN+ + + L K +E + S E GV + VK+ E+
Sbjct: 711 LEEEKKSRSKKKKNNKRNSTSLSTPLDKTVEHEPSVDLE-PGVTSPSLKIVKEDFMEPED 769
Query: 228 AAAHE 242
A E
Sbjct: 770 TRAGE 774
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +3
Query: 12 QLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFE 191
QL++ + A I +E+++ EK L D L +K E+Q K E + E
Sbjct: 323 QLERHRKNEEARIAREVEAHEKRIRRELEKQDM----LRRKREEQIRKEMERQDRERRKE 378
Query: 192 ERVKQRDKRLEEAAAHETALRARSR 266
E R+K+ EE + +R R
Sbjct: 379 EERLLREKQREEERYLKEQMRELQR 403
>At4g38560.1 68417.m05459 expressed protein
Length = 521
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 293 EKTVLERENRLYQVTTQLDEMKRVQEMV 376
E TV+E+E R + + +EMK++QE V
Sbjct: 439 ETTVVEKEGRERDMLLEREEMKKIQEEV 466
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.9 bits (59), Expect = 5.1
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 51 EKEMKSREKEAEERLRNADAENKT-LTKKLEQ---QTSKSSELAGVLIKFEERV--KQRD 212
E+E K E++AEE+ + EN+ + K E Q S+S E EE K+R
Sbjct: 528 EEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESEEKDESEEHSEEETTKKKRG 587
Query: 213 KRLEEAAAHETALRARSR 266
RL A E+A RAR++
Sbjct: 588 SRL-SAGKKESAGRARNK 604
>At4g10790.1 68417.m01759 UBX domain-containing protein low
similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1
protein) {Homo sapiens}; contains Pfam profile PF00789:
UBX domain
Length = 480
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSRE---KEAEERLRNADAENKTLTKKLEQQTSKSSELAG 173
+KE+L++E +++E ++RE +EAEER + L ++ K ++
Sbjct: 346 EKERLEREAAEAERKLKEEEEARERAAREAEERQAARVRMRQEKALALGEEPEKGPDVTQ 405
Query: 174 VLIKF 188
VL++F
Sbjct: 406 VLVRF 410
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 6 KEQLQK---EFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGV 176
K+QL+K E A E E+ S+ + E L ++ L KKLE L
Sbjct: 186 KDQLKKTDTEMSCAKAK-EDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKETLEAE 244
Query: 177 LIKFEERVKQRDKRLEEAAA 236
+ K + + +Q K + AAA
Sbjct: 245 MKKLKVQTEQWRKAADAAAA 264
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERL--RNADAENKTLTKKLEQQTSKSSELAGV 176
+K++ +K +++E + + +E+ E L + DA+ K KK+ + + E
Sbjct: 316 EKDKEKKAAAAATSSVEAKEEKQEESVTEPLQPKKKDAKGKAAEKKIPKHVREMQEALAR 375
Query: 177 LIKFEERVKQRDK 215
+ EER K+ ++
Sbjct: 376 RQEAEERKKKEEE 388
>At5g38150.1 68418.m04598 expressed protein
Length = 574
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = +2
Query: 263 EARDLTIKQLEKTVLERENRLYQVTTQLDEMKRVQEMVAKLMSKSTS 403
E + +T + +KT L+ + + ++ ++LDE+++V+ A ++ K S
Sbjct: 368 EEKTVTKAETQKTKLDIDKKESELNSKLDELEKVKHTEALVLEKLES 414
>At5g11390.1 68418.m01329 expressed protein
Length = 703
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 24 EFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVK 203
EFG A I + +++ L + A+ L KKL + + EL L E+ V
Sbjct: 213 EFGDLSAKINMQTADQQRNVLRMLEKSLAKEMELEKKLSESRNTERELEMKLYSSEQDVV 272
Query: 204 QRDKRLEEA 230
++ E+A
Sbjct: 273 YMEEVTEDA 281
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 257 EIEARDLTIKQ-LEKTVLERENRLYQVTTQLDEM-KRVQEMVAKLMS 391
E+E + KQ +EKTVL+ + R Q+ ++E+ K+ EM + L S
Sbjct: 468 ELETTRESCKQGMEKTVLDEKERFTQIQWDMEELRKQCMEMESFLNS 514
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 18 QKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSE 164
+KE + A +K+ K +EKE E++ A A ++ K E+Q +E
Sbjct: 343 EKEGEEETAAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTE 391
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +3
Query: 60 MKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAAAH 239
++SR KE E+ + + L +++++ E EE++KQ + +E
Sbjct: 334 LESRLKELEQEGKVVNTAKNALEERVKELEQMGKEAHSAKNALEEKIKQLQQMEKETKTA 393
Query: 240 ETALRARSRPGT*PLSSWR 296
T+L + + L W+
Sbjct: 394 NTSLEGKIQELEQNLVMWK 412
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 6 KEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTK-----KLEQQTSKSSELA 170
+E+ +KE + E E + KE E+R + DAE T+ + E++ K +
Sbjct: 439 RERGEKEQEMDRYEREAERERSRKEREQRRKLEDAERAYQTRLRQWERREREKEKERQYE 498
Query: 171 GVLIKFEERVKQRDKRLEE 227
K +ER ++++ R EE
Sbjct: 499 KEKEKEKERKRKKEIRYEE 517
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 44 QHRKRDEIT*EGSRGEIEKR*RREQDADEETGTTNE*EQRAGGRPHKV 187
QHR+R+E+ E E + + E D D+E +N + AGG K+
Sbjct: 71 QHRRREEVVEEDEDSEDDDQEDEENDGDDE---SNPKQCVAGGSSTKI 115
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 27.5 bits (58), Expect = 6.7
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLI 182
+K + KE ++A EKE + + EAE + + K + +E TS+ + AG
Sbjct: 174 EKTEAGKEGQTEIAEAEKEKEGEKAEAENKEAEVVRDKK---ESMEVDTSELEKKAGSGE 230
Query: 183 KFEERVK---QRDKRLEEAAAHETALRARSRP 269
EE K +D ++EA T +P
Sbjct: 231 GAEEPSKVEGLKDTEMKEAQEVVTEADVEKKP 262
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 30 GVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQR 209
G++L N K+M E E+R+R + E + L E Q +SEL L +ER +
Sbjct: 89 GLELENSRKKMI----ELEDRIRISALEAEKLE---ELQKQSASELEEKLKISDERYSKT 141
Query: 210 DKRLEEAAAHETALRAR 260
D L +A + + L +
Sbjct: 142 DALLSQALSQNSVLEQK 158
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 99 NADAENKTL--TKKLEQQTSKSSELAGVLIKFEERVKQRDKRLEEAAA 236
++D E+K + T +LE Q K E + K + +K+ DKRLEE A
Sbjct: 524 SSDCEDKVMDVTDELEFQ-EKEIEHCSLQEKLDMELKELDKRLEEKEA 570
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQ 146
++E+ + +L +K K R+KE E+ + DA+ T EQQ
Sbjct: 248 EEEEAARRRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQ 295
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +3
Query: 39 LANIEKEMKSREKEAEERLRNADAENKTLT------KKLEQQTSKSSELAGVLIKFEERV 200
++ I K+M+ R E E L A ENK L +KL Q+ + L E
Sbjct: 522 VSQIMKDMEMRNNELHEELEQAKVENKGLNDLNFTMEKLVQKNLMLEKSISYLNSELESF 581
Query: 201 KQRDKRLEEA 230
+++ K EEA
Sbjct: 582 RRKLKTFEEA 591
>At3g50040.1 68416.m05471 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL035601
Length = 421
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 57 EMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRD--KRLEEA 230
E+K +E +++ R + ++ LTK+ + + SK G I F E ++R+ KR
Sbjct: 130 ELKVKEIQSQARGYEKEVKDYYLTKQFDLEKSKLEGFDGKSIPFRENNQRRNVFKRGRRK 189
Query: 231 AAHET 245
ET
Sbjct: 190 RVEET 194
>At2g30380.1 68415.m03697 expressed protein contains Pfam profile
PF04859: Plant protein of unknown function (DUF641);
expression supported by MPSS
Length = 519
Score = 27.1 bits (57), Expect = 8.9
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +3
Query: 3 QKEQLQKEFGVQLANIEKEMKSREKEAE--ERLRNADAENKTLTKKLEQQT-SKSSELAG 173
Q E L++ + L I+ K E A +RLR N+ +KL+ Q +K SE+
Sbjct: 115 QLEALRRIKRLYLKTIQLNAKKTEIAASCLDRLRYEIEVNEKHLEKLKAQVRAKESEIHS 174
Query: 174 VLIKFEERVKQRDK---RLEEAAAHETALRARSR 266
++ K E V + K R+ ++ E A RA S+
Sbjct: 175 LIKKQECLVAENRKLENRIVSVSSFEFAFRAASK 208
>At2g17990.1 68415.m02091 expressed protein
Length = 338
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 296 KTVLERENRLYQVTTQLDEMKRVQEM-VAKLMSKSTSANCATDVEQPQ 436
KT+ E RL TTQL+ K +E+ V KLM ++ D ++ Q
Sbjct: 273 KTIEELFERLVTKTTQLEGEKAQKEVEVQKLMEENVKLTALLDKKEAQ 320
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 275 LTIKQLEKTVLERENRLYQVTTQLDEMKRVQEMVAKLMSKSTSANCATDVEQPQR*SRMR 454
L +KQLEK E E ++ Q+ + K QE KL+ K+ + E+ + R++
Sbjct: 247 LLLKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETESRKRIK 306
Query: 455 R 457
+
Sbjct: 307 K 307
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 36 QLANIEKEMKSREKEAEERLRNADAENKTLTKKLEQQTSKSSELAGVLIKFEERVKQRDK 215
+L E + K + E E + +D E K L E S++SEL + + + +
Sbjct: 68 ELRGAESKAKRKMGEMEREIDKSDEERKVL----EAIASRASELETEVARLQHELITART 123
Query: 216 RLEEAAAHETALRA 257
EEA A LR+
Sbjct: 124 EGEEATAEAEKLRS 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,229,545
Number of Sequences: 28952
Number of extensions: 123724
Number of successful extensions: 871
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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