Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30946
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    29   0.16 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.4  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 148 AEISGDFGATGGDETIVEGGHGGATSTQYGPPGHVAVPFIKR 273
           +E S D   T G  +  +GG GG++S + GPP H+  P++KR
Sbjct: 229 SEASDDDSGTEGGSS--QGG-GGSSSKKGGPPPHI-YPWMKR 266


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = -2

Query: 273 SFNEGDRDVSGRTILSAGSSTVTSFNNGLISASRTKIAANFSSAMASS 130
           S +E   D+S R    A SSTVTS N    SA    IA   +S  A S
Sbjct: 408 SASEQAWDLSCRRSSDATSSTVTSSNKRSSSAMSGPIATPDTSRPAKS 455


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 154 ISGDFGATGGDETIVEGGHGGATSTQYGPPGH 249
           + G  GA GG  +    G G A+ + YG  GH
Sbjct: 676 VGGGSGAGGGAGSSGGSGGGLASGSPYGGGGH 707


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,268
Number of Sequences: 2352
Number of extensions: 9315
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)