BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30946 (625 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U62794-1|AAB66594.1| 223|Homo sapiens CDC42 GAP-related protein... 33 0.62 >U62794-1|AAB66594.1| 223|Homo sapiens CDC42 GAP-related protein protein. Length = 223 Score = 33.5 bits (73), Expect = 0.62 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 428 LPPRSAVSC-HCIMAWPKSIRFIVAIHSTCY*CTVLVLFE 544 +PPR +SC C+ + K+I+ + +H T + T+L+LF+ Sbjct: 32 VPPRLLLSCPFCLCRYKKNIKALYIVHPTMFIKTLLILFK 71 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 65,605,365 Number of Sequences: 237096 Number of extensions: 1233986 Number of successful extensions: 2252 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2252 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6747805200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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